LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00615	ATGGAAGATGTGAATCACACCCCAAGAGAAGCAAAGGATTATTACAATTCTCAACTATGGTTGCTAGAAACTGCACAAGCATTTGGAGATCTCAAGAGAAGTGACAAAAATGGAGTTAATGGCTTCCATTTTACTGCCGGTAGAGATTCCTTCGTCTATAACTCCCAAGAAATAATGACTCCTGAAATTTCTGGAGCGTTTGAAGAAATTAAAAGTTTAATTAGTAGCAGAAACGGGGCTAATGATGAGGTGGTTGACCAAGAAAACGGTGATTATGGCCGCTATTCTATGCAAACGTTGTCAACAGAAATTGTGGAAATAGTTGAGGATGGCAACAGCATAACAAAAAACAAAGATAGAAGGGTTGATGATCTGTATGTTGCTGTTGGCAAAGATGACTTGGATGCAGTGAAATGGGCTCTTGATCATGCTGTCTCTCCCGGTTCCAGGATTTTTCTTGTCCACGTCTCTTCTCCAATCACATTGATTCCTACTCCAGTTGGAAGGTTTGAAAGAAGTCAACTGACCCCACAGCAAGTGAGACTATACGTGAATGAAGTGAACAACAAGAGGAAGGATCTTTTGCAGAAGTACATTAAGATGAGTAATGAAGCCAATGTAATAGCAGAAACGTTACTTCTGGAGAGCAATGACACAGGAAAAGCAATTCTGGATCTCATCTCTATACTTAGCATAACCAACCTTGTCATTGGAATCAAAAGGCTACCTTACACACGGCGCAACAACAAACTGAGCATTGGAGAGTTCGTAAAGAAACATGCACCGAATACCTGTGAAGTTACCTTGGTTTATAATGGCGAAGTGTTTGTGTCAGACCCTTACATGGATGGCTTGGCAAGTCCAGTTCAGTCAACTATTGATTTTCTCTCTCAACTCTATATGTACAATAAATTAGACTGGGAAGATGGTGCATCAAAGAAGATGATGGTATATAGTACATTTCTCACACCAGCAAAAACAAGCACTGGGTCAACGAGTAGTCTTAGTTTTCCAGCGTGTTGA	1023	0.4047	MEDVNHTPREAKDYYNSQLWLLETAQAFGDLKRSDKNGVNGFHFTAGRDSFVYNSQEIMTPEISGAFEEIKSLISSRNGANDEVVDQENGDYGRYSMQTLSTEIVEIVEDGNSITKNKDRRVDDLYVAVGKDDLDAVKWALDHAVSPGSRIFLVHVSSPITLIPTPVGRFERSQLTPQQVRLYVNEVNNKRKDLLQKYIKMSNEANVIAETLLLESNDTGKAILDLISILSITNLVIGIKRLPYTRRNNKLSIGEFVKKHAPNTCEVTLVYNGEVFVSDPYMDGLASPVQSTIDFLSQLYMYNKLDWEDGASKKMMVYSTFLTPAKTSTGSTSSLSFPAC	340

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00615	340	Gene3D	HUPs	127	270	IPR014729	-
	Vimu7g00615	340	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	86	289	-	-
	Vimu7g00615	340	Coils	Coil	184	204	-	-
	Vimu7g00615	340	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	132	270	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g00615	123	278	U-box Gene Family	AT3G61390	29.630	1.21e-12	66.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g00615	-		-	pvu:PHAVU_003G204300g	530.02

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00615	7	6196271	6198106	Vimu7g00615	7	6196271	6198106	ECH