Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00612 ATGACAAAGATTAGCGAGCTGTGCGGTTCGCCGGCGACACTCCGGTGTCCTTTGCCAAACGGGGACTTGGACACCTTGATTTCCGTCAAAAACGACGAAGATTTGGCAAATATAATCGAGGAATACGATCGAGCTTCGTCGTCCTTACCTCATCGGATGAAGATCAGAGCCATTCTTTTGCCGCTGGACAAATCCTCTCCTTCTCCATCTTCTTCGTCCAGCGCCTCTCACAGTCCGCCTGGTTCGCCTCACTCATCCGCCAGTTCCCCGCCGTGTTCTGAGGCTCACCGATTCGGCTGCCGGAACTGCTCGCCAGCTGCGTATTCTATATGCCCCCGTAACGGAGCGGCAAAATCCGGCTCGCATCACTTCTCTCCCTGTTCCCTACCGTGCTACGCGGTGCACCGGTTCCGTTGCCGGAATTGTTCCTCGGGTGCGTATCTTACCAGCATCCGTAATGGAGCGGCGAAATCCAGTTCTCCTCACTCCTCCGGCGGCTCCCCGCCGTATTCCACGGCCCACTGGTTCGCCTGCCAGAATTGCTTGCCGATTTCGTATCCAATAGGCGTTTGTAACGCGGCGGTAAAAGGATGTTAG 597 0.5595 MTKISELCGSPATLRCPLPNGDLDTLISVKNDEDLANIIEEYDRASSSLPHRMKIRAILLPLDKSSPSPSSSSSASHSPPGSPHSSASSPPCSEAHRFGCRNCSPAAYSICPRNGAAKSGSHHFSPCSLPCYAVHRFRCRNCSSGAYLTSIRNGAAKSSSPHSSGGSPPYSTAHWFACQNCLPISYPIGVCNAAVKGC 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00612 198 MobiDBLite consensus disorder prediction 64 90 - -
Vimu7g00612 198 Pfam PB1 domain 1 52 IPR000270 GO:0005515
Vimu7g00612 198 SUPERFAMILY CAD & PB1 domains 2 65 - -
Vimu7g00612 198 PANTHER OS05G0427100 PROTEIN-RELATED 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00612 Vimu-Chr7 6166963 6167559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00612 1 69 MAP Kinase Kinase Kinase AT1G04700 46.377 1.48e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00612 - - vun:114177582 295.434