Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00592 ATGGCGGAGCTGATGAGGAATCCAAATAGCATGGAAAAGGCTCAGGAAGAAGTGAGAAGAGTGGTCGGGGATAAAGCAGAAGTTGATGAAGATGACGTGAAGCAAATGAGTTATTTGAATTGTGTAATCAAAGAAACCTTGAGGTTGCATCCACCAGCTCCTCTTCTTCCTAGAGAGACAACCTCTGCTGTGAAACTAAGAGGGTACGATATTCCAGCGAAGACAAGAGTAATGTTGAACGCATGGGCCATACAGAGAGACCCTGAACTTTGGGAAAGGCCAGATGAGTTTCTTCCTGATAGATTTGAAAAGAAGGACGTAGATTTCAATGGACAAGATTTGTATATTCCATTTGGTGGCGGAAGAAGGGGATGCCCTGGAATTACATTTGGGATCACTGTAGCTGAGTATGCACTTGCTAATCTTCTTTATTGGTTGGATTGGAAATTACCTAAAACTGATGGAACTGTGCAAGGTATTGACATGAACGAGAGATATGGAATCACTGTCAACAAGAAGGTTCCACTTCTCCTTCAACCAATACCCTTCTCCTAA 555 0.427 MAELMRNPNSMEKAQEEVRRVVGDKAEVDEDDVKQMSYLNCVIKETLRLHPPAPLLPRETTSAVKLRGYDIPAKTRVMLNAWAIQRDPELWERPDEFLPDRFEKKDVDFNGQDLYIPFGGGRRGCPGITFGITVAEYALANLLYWLDWKLPKTDGTVQGIDMNERYGITVNKKVPLLLQPIPFS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00592 184 Gene3D Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 Pfam Cytochrome P450 2 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 SUPERFAMILY Cytochrome P450 1 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 Coils Coil 11 31 - -
Vimu7g00592 184 FunFam Predicted protein 1 178 - -
Vimu7g00592 184 PRINTS E-class P450 group IV signature 109 125 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 PRINTS E-class P450 group IV signature 125 143 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 PRINTS E-class P450 group IV signature 36 52 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 PRINTS E-class P450 group IV signature 85 103 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 PANTHER CYTOCHROME P450 71B11-RELATED 1 181 - -
Vimu7g00592 184 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 118 127 IPR017972 GO:0005506|GO:0016705
Vimu7g00592 184 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 PRINTS P450 superfamily signature 116 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00592 184 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00592 Vimu-Chr7 6025938 6026492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00592 1 180 Cytochrome P450 AT3G26210 52.459 2.81e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00592 K20617 - vra:106753291 360.918