Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00587 ATGGCTCTTAAACAAAGGCCTTTTGAGCAAATGGAAGGAGTTTTCTCTTCTACCTTCTATCTTGCTCTTTCCTTTTTCATCGGTGTTCTGTTATTCTTTAAGCTCGCAAGAAGATCCAAACCCAAAACCAATCTGAATCTACCACCATCTCCACCAAAGCTGCCATTCATAGGCAATCTGCATCAGTTTGGGACACTGCCACATCGAGCTCTTCGAGATCTTTCTCTAAAATATGGAGACATAATGATGTTGCAGTTGGGACAGATGCAAAATCCAACCCTCGTCGTTTCATCTGTAGATTTGGTCACCGAAATAACCAAAACACATGACCTAGCCTTTTCCGACCGACCCCAAAATACTTCCTCTAAAATCTTACTCTACGGATGCACAGATGTTGGCTTCTCACTATATGGAGAAAACTGGAGAGTGAAAAGAAAAATATGTGTTCTTGAACTTTTGACCACCAAAAGGGTGCAATCATTTCGAGTCATCAGAGAAGAAGAAGCTGGGGAGTTGGTGAAAAAGCTACGTGAAGCAAGCTCGAACGATGCCAGTTACGTGAATCTGAGTGAGATGATTATGTCAACAACAAATAGTATCGTGTGTAAATGTGCTCTTGGAAGGAAGTTTGCAGGAGATGGTTACAGCAGAGTGAAAGTGTTGGCAAGGGAAGCCATGATTCATATTGCAGCTTTCACTGTTAGAGATTACTTCCCTTGGTTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACAGCTGCAGCAATGGATGCTTTATTTGAGGAAGCAATTGCAGAACGTTTGAGGGCGAGAAGAGAAGGTGATCACTCCAAAATGAAAGATTTCTTGCATATTCTCCTCAACCATCACGAGGATAACACGCTGGGATACGAGTTCACCAAAAATGACATCAAATCACTCATAACGATGAGACTAGAGTCGAATCTGGCTTATCTGACAGCTATAGTCACCACCAACGATGTTTATTTTTCGTGGACTGCATCGCTGGTGGCAGACATGTTTCTGGGAGGTACCGACACAACTGCGGCCACATTAGAATGGGCCATGTCAGAACTTATGAGGAACCCAACCACAATGAAAAAAGTGCAAGAAGAAGTGAGGAGGGTAGTAGGTCATAAATCAAAGGTGGAAGAGAATGATGTGAATGAAATGCGATTTCTAAAATGTGTAGTTAAAGAAACTATAAGGTTGCACCCTCCAACTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTTAAACTAAATGGATACGATATTCCTGCAAAAACAACGGTATATATCAATGCATGGGCAATGCAAGTGGATCCTAAACTTTGGGATCGTCCTGAAGAGTTTCTGCCAGAGAGATTTGAAAACAGTGATTTTGATTTCAAAAACCAAGAAAACTTTCACTTCATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATGAGTTTTGCAATTAGTTCAATTGAGTATGTGCTTGCCAATCTTCTTTATTGGTTCGACTGGAAGTTGCCTGAAACTGATACTGCCACACTTGATATAGACATGAACGAGATATTTGGACTTGTTGTCTCAAAGAAACTACCACTTCTCCTTAAACCAAAAGCCTTTTCATCTTGA 1647 0.4123 MALKQRPFEQMEGVFSSTFYLALSFFIGVLLFFKLARRSKPKTNLNLPPSPPKLPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQNPTLVVSSVDLVTEITKTHDLAFSDRPQNTSSKILLYGCTDVGFSLYGENWRVKRKICVLELLTTKRVQSFRVIREEEAGELVKKLREASSNDASYVNLSEMIMSTTNSIVCKCALGRKFAGDGYSRVKVLAREAMIHIAAFTVRDYFPWLGWVDVVTGKIQKYKATAAAMDALFEEAIAERLRARREGDHSKMKDFLHILLNHHEDNTLGYEFTKNDIKSLITMRLESNLAYLTAIVTTNDVYFSWTASLVADMFLGGTDTTAATLEWAMSELMRNPTTMKKVQEEVRRVVGHKSKVEENDVNEMRFLKCVVKETIRLHPPTPLLAPRVTMSDVKLNGYDIPAKTTVYINAWAMQVDPKLWDRPEEFLPERFENSDFDFKNQENFHFIPFGFGRRGCPGMSFAISSIEYVLANLLYWFDWKLPETDTATLDIDMNEIFGLVVSKKLPLLLKPKAFSS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00587 548 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Vimu7g00587 548 FunFam Cytochrome P450 99A2 37 544 - -
Vimu7g00587 548 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PANTHER CYTOCHROME P450 71B11-RELATED 33 543 - -
Vimu7g00587 548 CDD CYP71-like 77 534 - -
Vimu7g00587 548 SUPERFAMILY Cytochrome P450 48 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 Gene3D Cytochrome P450 33 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 441 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 400 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 Pfam Cytochrome P450 340 531 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00587 548 Pfam Cytochrome P450 48 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00587 Vimu-Chr7 5963488 5967043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00587 48 546 Cytochrome P450 AT3G26330 41.223 2.06e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00587 K20617 - gmx:100803922 783.482