Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00582 ATGATCTCATTGGTAGTGTTTGGGTTCCTCACGCTCCTTCTCACCTTCTCATTGCTCACACAGTTGAGAAAGCCCTCTGCAGAAAAGAGAAGGCTACCTCCGGGGCCAAAGAAACTACCCTTCATTGGCAACCTCCACCAGCTTGGAACGTTGCCCCATCGATCCCTTCAACAACTTTCACGTAAGCATGGACCTCTCATGTTCTTGCAGCTAGGTTCCATACCAACCTTGGTAGTCTCTTCTGCTGACATGGCGAAAGAAATCTTCAAAAACTATGACTCAGTTTTCTCTGGAAGGCCTCTAGTACACGCCGCAAACCGGTTAGGATACGGTTCAGCCGTGAGTTTTGCACCGTATGGTGAGTACTGGAGGGAAATGAGGAAAATCATGATCTCAGAGTTACTGAGTCCGAAGAGGGTTCGATCGTTTGAAGCTGTGAGATTTGACGAGGTGAAACGTATGCTTCAGGCTGTTTCTCTGTCCTCTGGTCCAGTCGACCTGAGTGAACTTACTCTCTCGGTGACCAACAACGTTGTTTGTCGGGTTGCTCTCGGCAAAAGGGAAGAGGGTAGGGGTGATTCAAATAAGGTTTACAGAATGCTTAAAGAAACGCAGGAAATGTTGGGAGGGTTTTTCGTGGATGACTTCTTTCCACATTTGGGGTGGCTGAACAAATTCAGTGTCCTTGAAAGGAGGCTAGAGAAGAATTTCAGAGAAATGGACCGGTTTTACGACGAAGTGATCAAGGAGCACGTTGATAAGTCTCGTGAGACAGCAGGAGCAGAGCATGAAGATGTTGTGGATGTGCTGCTTCAAGTTCAGAAGGATCCGAATCAACCCATTGCCATCAGTCACCAACAAATCAAGGGAGTACTAGTGGACATATTTGTAGCAGGAACTGATACTGGCGCAGCAACAATGATATGGATAATGACCGAGTTGATTAGAAATCCGAAAGCGATGAAAAAGGCACAAGAAGAAGTAAGAGAAATTATGGAGGGAAAGTACATGGTAGAAGAAATTGACCTCCCAAAGCTCTTGTACCTCAAGTTAGTTGTGAAGGAGGCACTGAGACTCCATCCACCTGCGCCATTGCTTGTGCCAAGAGAGACAACAGAGGCCTGCGTGATCAAAGGCTTTCAAATCCCTGCCAAAACGAGGGTGCTTGTCAATGCAAAATCAATAGCAATGGATCCAGCTTGTTGGGAGAACCCAAATGAGTTCTTACCAGAAAGGTTCTTGAACAGCTCAGTAGATTATAAAGGCCAACACTTTGAGATGTTGCCATTTGGGGTAGGCCGAAGGAGTTGCCCTGGAGTGAACTTTGCCATGCCTCTTGTTGAGTTAGTACTTGCAAATCTTCTGCTTCGTTTTGACTGGGAACTGCCTGCTGGACTTGGAATACAGGACTTGAATATGGAAGAAACAATTGGCATAACCATGCACAAGAGAGATCATCTTTGGCTGAGAGCCATCCCCTTTTAG 1485 0.4633 MISLVVFGFLTLLLTFSLLTQLRKPSAEKRRLPPGPKKLPFIGNLHQLGTLPHRSLQQLSRKHGPLMFLQLGSIPTLVVSSADMAKEIFKNYDSVFSGRPLVHAANRLGYGSAVSFAPYGEYWREMRKIMISELLSPKRVRSFEAVRFDEVKRMLQAVSLSSGPVDLSELTLSVTNNVVCRVALGKREEGRGDSNKVYRMLKETQEMLGGFFVDDFFPHLGWLNKFSVLERRLEKNFREMDRFYDEVIKEHVDKSRETAGAEHEDVVDVLLQVQKDPNQPIAISHQQIKGVLVDIFVAGTDTGAATMIWIMTELIRNPKAMKKAQEEVREIMEGKYMVEEIDLPKLLYLKLVVKEALRLHPPAPLLVPRETTEACVIKGFQIPAKTRVLVNAKSIAMDPACWENPNEFLPERFLNSSVDYKGQHFEMLPFGVGRRSCPGVNFAMPLVELVLANLLLRFDWELPAGLGIQDLNMEETIGITMHKRDHLWLRAIPF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00582 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vimu7g00582 494 CDD CYP71-like 62 487 - -
Vimu7g00582 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 Gene3D Cytochrome P450 22 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 FunFam Cytochrome P450 99A2 22 492 - -
Vimu7g00582 494 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00582 494 PANTHER CYTOCHROME P450 71B11-RELATED 15 491 - -
Vimu7g00582 494 Pfam Cytochrome P450 33 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00582 Vimu-Chr7 5898070 5900972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00582 22 489 Cytochrome P450 AT4G31500 45.912 1.34e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00582 K20617 - gmx:100806157 752.666