Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g00565 | ATGGGATGGACTAAACAAAATGCTCAACATGATTCAAATGGTGTTCCCATTCAATCTGTTGAGCACCATGCACAGATTGCTGATCAAAATTATGAGGAGGCTTTAAATTCTGAAAGAGAAAAAGGCAATACAGCTCTTGCATTATTGGCATCAGCGTATGGAAATTCTTCTGACTCTGAGGAAGGTCAGGGGGAATTAGATATTGCACTTGATGGTGATGAATTGAATGCGCCTCTAATGGATTTCAGGAGATGTCTAGTATGCCTTCTCATTTTCAAGATCCCCATACTAGTCCCATGGTTAGAGTCATTAGACTTAATAAAGGAGATGATATTCATTCAAGAAGAATAG | 351 | 0.3875 | MGWTKQNAQHDSNGVPIQSVEHHAQIADQNYEEALNSEREKGNTALALLASAYGNSSDSEEGQGELDIALDGDELNAPLMDFRRCLVCLLIFKIPILVPWLESLDLIKEMIFIQEE | 116 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu7g00565 | Vimu-Chr7 | 5731853 | 5732526 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu7g00565 | 5 | 61 | C2H2 Transcription Factor Family | AT3G48430 | 40.000 | 6.03e-08 | 47.8 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g00565 | - | - | lang:109362418 | 106.301 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu7g00565 | 7 | 5731853 | 5732526 | Vimu7g00565 | 7 | 5731853 | 5732526 | ECH | |
| Vimu7g00565 | 7 | 5731853 | 5732526 | Vimu7g02451 | 7 | 20975874 | 20995166 | PCT | |
| Vimu10g01381 | 10 | 14607812 | 14617477 | Vimu7g00565 | 7 | 5731853 | 5732526 | PCT |