Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g00550 | ATGGCAATCGTTTCGCGCTTGTTCGTGATCCCAGCCGCGAGGCCCGTTCTCGCCAAAACCATATTCTTCATGTCCTCTTTCTCAGCTCGCACGTTCGAACCGTGCGAGCCGTCACCTTCCCCTGCACGCTCCGAGGAAGAATCGCGAAACGTGAGGGTTTGGGCATGGTGGGACTTCAAGAACTGCCACGTGCCCCCGGATTTCGACGCTTCCAAAGTCGCACCGGCAATAATGGAGGCAGTGAGAGCAAACGGAATCAAAGGACCTCTCAACATCACCGCTTTCGGCGACGTTCAACAACTCCGCAGGGATCATCAGGAAGCACTCGCCTACACCGGCGTTCGCTTCATCCACGTCTCTGACGAGGGAAGAAACAGTGCCGACATTCTCGTTGATCTAATGTATTGGGTTTCTCAGAACCCTCCGCCGGCGCACATATTTCTGATATCCGGCGATAGAAACTTCGCTGGCACGTTACACCGCTTGAGAATGAGTAATTACAATATATTGCTCGCTACGCCGGAGAAAACTCCCAGTGTTCTCCACAGTGCTGCCACGATAGCCTGGATGTGGGATTCGTTGCTCAACGGAGAAAATCTTACTGGAAAGGTCCTCAACCACCCTCCTGACGGGCCTCTTGGCTCTTGGTATGGAAGCTACAAAGAGCCGGTGACGGTGGCGGATCTGGTGACGGAGGAACCGGTCACAGTTGCAGCTCCGCAGGCTACCTCGTTGCCCAATGTGGAGGTCTGCCCTTCTAGGAGCACGGTTCCTAAGTCGGTTTTGAGTAAGATTTGCAATATTTTGAGTTTGCATCCCAAAGGAGTGGGCATTGATCATCTTCGCGCTGAGTTGTTGAAAATTGATGTGCGTTTGGATAAGAATTGGTATGGACATAAAAAGTTTTCCCGCTTTCTGTTGTCGATGCCAGGGGTAGATCTTCGGTCTATTGGTGATGGTCCTCTTCGTGTACATTTGGTTCCTGTGGAATCCATGGAACCATGTAAGAACAGCTCTTTGGAATCAACAGTTTCTGATGCTACGAATGAGGAGAAACGATGTGCAGCGGCACCAAAAGTAAATGGCGAGGGTAAAAGTAAGGTTAGGGATGCTGACAAGAAATTGTCAAATGCTACGAATGAGGAGAAACGATGTGCAGTAGCATCAAAGGTAAATGGCGAGGCTAAAAGTAAGGTTAGGGATGCTGACAGGAAATTGTCAAATGCTACAAATGAAGAGAAACGATGTGCAGCGGCATCAAAGGTAAATGGCGAGGCTAAAAGTAAGGTTAGGGATGCTGACAGGAAATTGGCAAATGCTACGAATGAGGAGAAACGATGTGCAGCGGCATCAAAGGTAAATGGCGAGGTTAAAAGTGAGGTTAGGGATGCTGATAGGAAATTGTCAAATGCTGAAAGGAGTATGGGGGACTATTTAAAATCAGTACAACCGGGGCCTTCAAAAGGGAGACCTGTTGAGGAAAATGGGTTGCGGAAGTCTGCTGTGGCTTGTGACAGGTTTGTGGATGTGGCTAATGCTCCACAGTCAGAAACTGAACTGCCACATGAGGACAGCAAAGATTCCAAAACTAAGATGGATACCCTAAAAAAGAGTTCTAAAAAATTGACTGATAATAACACTGTTTGGTCTCAAGTTGCTGGTATGGAAAAACATACTACTAAAGATAATCTCTCTGCTGGAAATGATCAATCGATGGTGGAAAACAATGTTATGGCTAATTATGATTCTGGAAATTTTGAAGCAAAGAATGAATGTGAGAATCGAACTAGTAAGGAGGTTGACGAAGTTTTTCCAAGCCTATCTACACCAATTGATTGCTCTGAGGCTGCCCAAAAGCCTGGCGGAAGCGCTGAAACTAATAAAACAAGTCCAACACTGTTTCACTGGATTAAACGGTGGTGGCCATTTGGGAAAAACAATGAAAAATATGATGATTTGACCGCTCATCAAAGGGAGGGAGTTAGTCATGTTGAGGATTCCAAGTTATCTGAACTGGAGCAGACTGTTAGTCAATCTGAAGAGGTCAAATCATCTGAACTGGATCACACTGTAAGTCAATCTGAAGAACCCAAGCTACCAGAACTGAATCAGAATTCTGGTCATTCCGGAAAGCCTGAGTTAAAATATGATGATTTGACGGCTCATCAAAGGGAGGGAGTTAGTCATGTTGAGGATTCCAAGTTATCTGAACTGGTGCAAACTGTTAGTCAATCTGAAGAGGTCAAATCATCTGAACTGGATCACACTGTAAGTCAATCTGAAGAGCCCAAGCTACCAGAACTGAATCAGAATGTTGGTCTTTCCGGAAAGCCTGAGTTATTTTCCAGTGCTGCCTTTTGGAATGATATGGAATCTTTTATGTTCGCACCCAAAGGATCACTTCTTTTCTCCCAGTCAAGAAGCAGGGAGGATGTTGCGCAAAGGTTACAAAATGGAGGACCCCTGCTTCTCAGATCACTCCCCAAAAAAGATATCCTTCAATTGGTTGATATGTTAATAGCAGACAAAAAATGGTTGGAGGAAAGGCCGTCCCAAACATTTCCTTTTAAGCTAACTCAGCCAGTTCATAAGAATTTATCGGTGGACCAATCCCGTAGTGGCAATGGTTTGAGATCTATCTTTCTACGCAGATCATCACAATCTCTAGAACATGATGTGGGGAAACACAATCAGAGTGTTCCTCATACACCAATTTCTGCAGCGGCTGTTGAAACAAAACATTTTGAGAGATCTAGAAATGATATATTAGATGACTGTCAGAAACTTGTTAATGAGATATTAAGGGAACACCCAGAGGGATATAATATTGGTGCTTTCCGAAGACTATTTGTTGATAAGTATGGCTATCATCTTGATTTACAGAAGCTTGGTTATCAAAAATTGGTAGCCTTGCTACAGATAATGCCTGGGGTTAAATTTGAGTCTACTTACATTTATCCTTCTGTTCCTGCTGTATGTGATTCTGATTCGGATACTTCTATCCTCAAAACTAAAGCAACCGCTGATAATCATGCAGTCTCCAACTCAGATAGCGAATTATCTGAGTCAACCCTGAAAGATGATGACATGGAATCTGAATGGGAGGAGTTGGGTCCTGTTTCTATAAAAAATTTTGACAAGAGTGGTTTGGGTTATGAACTTGTATCAGATGACGATACTTCTGCATCTGAAGGAGACCACTCTTATTTAACTCAATCTGAAGAGCAGACGAAATCAATTTGTAATGAACGGGACAGTTCGTTTTGGGAAACTATGGATTTGTGGCACAGCTGCAAGGAAGGAGAGAATGGTGTCAAGAAGTCAGACAATGTTGACAGCTTGAGTGTTTCTGTGGCTCATATTTTAAATTCATCCCCTGACCCAGCCATTGTTTTCCCTTCCAAAACATCAAATTGCAGAGATAAACAAAGGTCTTACAAGAACTATTCTTTCGTTGTTGATCAAGTCTTACATGACAAGGACAAGCTGATTGGTGACTTCAAGAAAACTGATGAGTCAATGCAAAAACAGAGTAGTTCCTGCTGCAAGTAG | 3552 | 0.4406 | MAIVSRLFVIPAARPVLAKTIFFMSSFSARTFEPCEPSPSPARSEEESRNVRVWAWWDFKNCHVPPDFDASKVAPAIMEAVRANGIKGPLNITAFGDVQQLRRDHQEALAYTGVRFIHVSDEGRNSADILVDLMYWVSQNPPPAHIFLISGDRNFAGTLHRLRMSNYNILLATPEKTPSVLHSAATIAWMWDSLLNGENLTGKVLNHPPDGPLGSWYGSYKEPVTVADLVTEEPVTVAAPQATSLPNVEVCPSRSTVPKSVLSKICNILSLHPKGVGIDHLRAELLKIDVRLDKNWYGHKKFSRFLLSMPGVDLRSIGDGPLRVHLVPVESMEPCKNSSLESTVSDATNEEKRCAAAPKVNGEGKSKVRDADKKLSNATNEEKRCAVASKVNGEAKSKVRDADRKLSNATNEEKRCAAASKVNGEAKSKVRDADRKLANATNEEKRCAAASKVNGEVKSEVRDADRKLSNAERSMGDYLKSVQPGPSKGRPVEENGLRKSAVACDRFVDVANAPQSETELPHEDSKDSKTKMDTLKKSSKKLTDNNTVWSQVAGMEKHTTKDNLSAGNDQSMVENNVMANYDSGNFEAKNECENRTSKEVDEVFPSLSTPIDCSEAAQKPGGSAETNKTSPTLFHWIKRWWPFGKNNEKYDDLTAHQREGVSHVEDSKLSELEQTVSQSEEVKSSELDHTVSQSEEPKLPELNQNSGHSGKPELKYDDLTAHQREGVSHVEDSKLSELVQTVSQSEEVKSSELDHTVSQSEEPKLPELNQNVGLSGKPELFSSAAFWNDMESFMFAPKGSLLFSQSRSREDVAQRLQNGGPLLLRSLPKKDILQLVDMLIADKKWLEERPSQTFPFKLTQPVHKNLSVDQSRSGNGLRSIFLRRSSQSLEHDVGKHNQSVPHTPISAAAVETKHFERSRNDILDDCQKLVNEILREHPEGYNIGAFRRLFVDKYGYHLDLQKLGYQKLVALLQIMPGVKFESTYIYPSVPAVCDSDSDTSILKTKATADNHAVSNSDSELSESTLKDDDMESEWEELGPVSIKNFDKSGLGYELVSDDDTSASEGDHSYLTQSEEQTKSICNERDSSFWETMDLWHSCKEGENGVKKSDNVDSLSVSVAHILNSSPDPAIVFPSKTSNCRDKQRSYKNYSFVVDQVLHDKDKLIGDFKKTDESMQKQSSSCCK | 1183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 396 | 430 | - | - | |
Vimu7g00550 | 1183 | CDD | LOTUS | 923 | 978 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 456 | 473 | - | - | |
Vimu7g00550 | 1183 | Coils | Coil | 423 | 443 | - | - | |
Vimu7g00550 | 1183 | Coils | Coil | 454 | 474 | - | - | |
Vimu7g00550 | 1183 | CDD | PIN_limkain_b1_N_like | 52 | 174 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 450 | 539 | - | - | |
Vimu7g00550 | 1183 | Pfam | OST-HTH/LOTUS domain | 923 | 977 | IPR025605 | - | |
Vimu7g00550 | 1183 | Pfam | OST-HTH/LOTUS domain | 259 | 322 | IPR025605 | - | |
Vimu7g00550 | 1183 | ProSiteProfiles | OST-type HTH domain profile. | 257 | 328 | IPR025605 | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 1012 | 1033 | - | - | |
Vimu7g00550 | 1183 | Gene3D | - | 917 | 984 | IPR041966 | - | |
Vimu7g00550 | 1183 | Pfam | NYN domain | 52 | 185 | IPR021139 | GO:0004540 | |
Vimu7g00550 | 1183 | ProSiteProfiles | OST-type HTH domain profile. | 922 | 996 | IPR025605 | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 396 | 411 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 742 | 762 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 696 | 710 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 661 | 714 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 519 | 539 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 1056 | 1076 | - | - | |
Vimu7g00550 | 1183 | PANTHER | LIMKAIN B LKAP | 42 | 932 | IPR024768 | GO:0005777|GO:0010468 | |
Vimu7g00550 | 1183 | Coils | Coil | 392 | 412 | - | - | |
Vimu7g00550 | 1183 | MobiDBLite | consensus disorder prediction | 357 | 380 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g00550 | Vimu-Chr7 | 5632282 | 5636173 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g00550 | 55 | 197 | C2H2 Transcription Factor Family | AT5G61190 | 41.379 | 1.17e-31 | 132 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g00550 | - | - | var:108320919 | 2147.47 |