Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00533 ATGAAAATTTGGCAGGCTGTTATTATTAATTTTATTATTGGTTGGCAGGTCAATGGATCTGATGTAATCATTATGGAAGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGAATATGAAGATATTTGTTGATGCAGATCCAGACGTGAGGCTTGCCCGCAGAATAAAACGTGATACGATTGAAAGGGGTAGAGATATACAATCGTATGCAAAATTTGTTAAGCCTGCCTATGAAGATTTTATTCTTCCATCCAAAAAATATGCTGACATCATAATACCTCGAGGGGGAGAGAATCGTGTAGCAATTGATTTGATTGTTCAACATATCCGCACTAAGCTTGGCCAGCATAACCTCTGCAAAATATATCCGAATTTGAATGTTATACAGTCTACTTTCCAGACTAGAGGCATGCACACTCTTATTCGTGATAGGAACATATCAAAGCATGATTTCATTTTTTACTCAGATCGGCTAATTCGATTGGTAGTGGAACATGGTCTTGGTTACTTGCCGTTTACAGAGAAACCAGTAATCACACCTACAGGCTCAATTTATACTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCGATTATTCGAAGTGGCGAGAGTATGGAAAATGCCTTTCGTGCTTGCTGTAAAGGAATAAAGATTGGAAAAATTCTCATTCACCGCGATGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCTAAAGATATTTCGGAGAGACATGTTCTTCTCATGGACCCAGTACTCGGTACAGGTAACACTGCCAGCGAAGCAGTGGAGCTTCTCATAAAGAAGGGAGTTCCAGAGTCCCAGATAATATTCCTTAACCTCATTTCTGCTCCTGAGGGCATACAATGTGTTTGTAAACGTTTTCCGCATATGAAAATTGTCACATCGGAGATCGAAGAAGGATTAAATGACCAGCTCCAGGTCATACCAGGGTTGGGCGAATTTGGAGACCGTTACTTTGGAACGGACGATTCCTAG 1011 0.4006 MKIWQAVIINFIIGWQVNGSDVIIMEGILVFHEQRVRNMMNMKIFVDADPDVRLARRIKRDTIERGRDIQSYAKFVKPAYEDFILPSKKYADIIIPRGGENRVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQTRGMHTLIRDRNISKHDFIFYSDRLIRLVVEHGLGYLPFTEKPVITPTGSIYTGVDFCKKLCGVSIIRSGESMENAFRACCKGIKIGKILIHRDGDETQLIYEKLPKDISERHVLLMDPVLGTGNTASEAVELLIKKGVPESQIIFLNLISAPEGIQCVCKRFPHMKIVTSEIEEGLNDQLQVIPGLGEFGDRYFGTDDS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00533 336 FunFam Uridine kinase 119 333 - -
Vimu7g00533 336 CDD UMPK 17 115 IPR000764 -
Vimu7g00533 336 Gene3D - 10 118 IPR027417 -
Vimu7g00533 336 Pfam Uracil phosphoribosyltransferase 133 333 - -
Vimu7g00533 336 PANTHER URIDINE KINASE 16 244 - -
Vimu7g00533 336 CDD PRTases_typeI 192 293 IPR000836 -
Vimu7g00533 336 Pfam Phosphoribulokinase / Uridine kinase family 17 103 IPR006083 GO:0005524|GO:0016301
Vimu7g00533 336 SUPERFAMILY PRTase-like 118 334 IPR029057 -
Vimu7g00533 336 ProSiteProfiles UvrC family, homology region profile. 25 104 IPR001162 GO:0009381
Vimu7g00533 336 Gene3D - 119 333 IPR029057 -
Vimu7g00533 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 108 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00533 Vimu-Chr7 5508385 5512017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00533 16 335 PRT Gene Family AT5G40870 80.923 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00533 K00876 - gmx:100816209 585.874