Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00526 ATGGCCACCACCACCAGTCTTGGCGGCGGCGCTGGCGGAGATGACCGCGTCCTAGCCACGGCCCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGATAACAGACTATCCGGCATCTCCGACCTAATAAACGGTGACGATTCTAAATCCTCTGAAGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCCGACGCATCCCTCTCCGACGAGCCTTCGCGCCAATCCACTTCTCTCTTCAACCCTCCTAATAATCCCGCGGAGTACTTTTCCGCGGTTGATGAGATCATCCACTGGATGGAGCAGTTTTCGATCGCGCCACCGTCCTCCGCCGTGGGGCGCACAGGGCCCGCCATCGTGGACCGGGCGGAGAACGCGATTCAGCTCGCGATGTCGCGACTGGAGGACGAGATGCGGCACGTGTTGATTTGCAACACGATCCCGCTCGACGCCGTGAGCCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCGGCTCGCATGACGGCGCCATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGTCGCTTCCATGAGCGAGGCGCGAGTCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAAGCGGTTCAGGATCTCAGGCAAATTATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCTCTGGATGAGTGTTTAGTCATTCTGGGTGTTGAGCGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGAAATTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGTCGTTGGGGTTTTGTTGAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGACTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTATTATGCAGTTACTGAATTTCGGCGAGGCTATTTCAATTTGTAAGCGCTCGCCGGAGAAGCTGTTTCGGATTTTGGACATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCTATGGTTTCGGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGACTTGGTGAGGCTGCCAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGAATGAAACTTCCAAAAAACCAGTCATAACTGGGGATGTTCACCCTTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGATTAGCGAGGAGGATCTCCATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAGGCCATGTCGCCCTTGGGGCAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTTGAGGAGAAGTCCAGGCTTTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATACGGCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCGTCGAAGATGGCTTTGAAGGAGAGATTCAAAAGCTTCAATGCCTGCTTTGAAGAAATTTATAGGGTCCAGACTGCTTGGAAGGTCCCGGACGATCAGCTTCGAGAGGAGCTGAGGATATCTATATCGGAGAAGGTGATTCCTGCATATCGCTCTTTTGTGGGTAGGTTTAGGAGTCAGTTAGAGGGAAGGCATGCGGGAAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGAAGGAAAAGTACATAG 1989 0.5068 MATTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSDEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQFSIAPPSSAVGRTGPAIVDRAENAIQLAMSRLEDEMRHVLICNTIPLDAVSRYGSIRRVSLSFGSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLRQIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRVEWRNLDEKMKNWVQAVKVVVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCIMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLEISEEDLHRFKNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00526 662 Pfam Exo70 exocyst complex subunit 286 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vimu7g00526 662 Coils Coil 137 157 - -
Vimu7g00526 662 Gene3D Exocyst complex component Exo70 90 654 - -
Vimu7g00526 662 SUPERFAMILY Cullin repeat-like 91 648 IPR016159 -
Vimu7g00526 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 649 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00526 Vimu-Chr7 5448813 5450801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00526 15 661 EXO70 exocyst subunit family AT5G50380 59.735 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00526 K07195 - gmx:100818693 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00526 7 5448813 5450801 Vimu7g00526 7 5448813 5450801 ECH
Vimu10g01623 10 19919256 19924041 Vimu7g00526 7 5448813 5450801 PCT