Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00522 ATGAAGATGAGGGTAGAAGGGTTCCTTAACATGATGAATATGGTAGCGGTGTTGGCGTGGTTGGTGAGCTTCAACATCGTTTTTTGTTTTGCTCATATTCATGGTTTCGGGGACCAACCACTCTCCAAGATTGCCATTGATAAAGCTGTTGTGTCTCTCCACTCTGCCGCTTCCATCACTGCCACACCGTCGCTTCTCGGTACGAAGGGTGAGGATACCCAATGGGTGACAGTAGATATTGATTACCCTGAACCATCTGCAGATGATTGGGTTGGAGTTTTCTCTCCTGCAAAGCTCAATTCATCAACATGTCCACCTGTGAGTGATCCAAGAGAAGAGATTCCGTACATATGCTCAGCCCCGGTTAAGTTCCAGTTTTTGAATTACTCCAACTCACACTATACAAAGACAGGAAAAGGTTCTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTTGCTCTATTTTCAGGAGGACTATTAAATCCTAAGCTTGTGGCAGTTTCCAATTTCATATCATTTGTCAATCCTAAGGTGCCTCTATATCCACGACTTGCTCAGGGGAAGTCTTGGGATGAAATGACAGTTACCTGGACCAGTGGATATCACATAAATGAAGCTATACCGTTTGTTGAGTGGGGTTCTGAGGGTAAAACACAAGTGCAATCTCCTGCCGGAACATTGACATTTGGTCGTAACAGCATGTGTGGTTCACCTGCACGAACTGTTGGCTGGCGTGACCCTGGTTTCATACATACAAGTTTTCTAAAAAATCTTTGGCCAAACTTAGTGTATACCTATCGATTAGGGCATCTACTGTCTAACGGTTCTTATGTTTGGAGCAAGAAATATTCATTTAAGTCATCACCTTATCCTGGACAGGACTCACTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCCGAGCGTGATGGTTCAAATGAGTATAATGCCTATCAACCTGGTTCGCTTAACACCACTGACCAGCTCATCAAGGATTTAGAAAATATTGACATTGTTTTCCACATAGGAGATATAACTTATGCAAACGGATACATCTCGCAGTGGGACCAATTCACTGCTCAAGTGGAACCAATTGCATCAACAGTACCTTACATGATTGCCAGTGGTAATCACGAACGTGATTGGCCCAACACAGGATCCTTTTATGACACTACAGATTCAGGTGGCGAATGTGGAGTTTTGGCCCAGAACATGTTTTTTGTTCCAGCTGACAACAGAGCAAACTTTTGGTACGCGACGGATTATGGCATGTTCCACTTCTGCATAGCTGACAGTGAACATGATTGGAGAGAAGGAACAGAACAATACAAATTCATTGAGCATTGCCTTGCAACAGTAGACAGACAGAAACAACCCTGGTTGATTTTTGTGGCTCATCGTGTGCTTGGATATTCTTCTAATTCTTGGTATGCCATGGAGGGTTCATTTGAAGAGCCCATGGGAAGGGAAAGTCTGCAGAAACTCTGGCAGAAATATAAAGTAGATATTGCATTTTATGGTCATGTCCATAACTACGAAAGGACATGCCCCATATATCAGAATCAATGTGTGAATGATGAAAGGTCTCAGTATTCTGGTGTTGTAAATGGAACAATTCATGTTGTTGCTGGAGGTGCAGGAAGCCACTTGTCAGATTTCAGTGAAGTAATCCCAAAGTGGAGTCTTTACAGAGACTATGACTTTGGGTTTGTAAAGTTGACAGCATTCAATCATTCATCTCTCCTCTTTGAATACAAGAAAAGCAGTGATGGAAAGGTCTACGATTCTTTCACCGTTTCAAGGGATTACAAAGATGTCTTAGCCTGTGTGCATGATGGCTGCGAAGCAACCACTTCAGCAACTTGA 1878 0.4281 MKMRVEGFLNMMNMVAVLAWLVSFNIVFCFAHIHGFGDQPLSKIAIDKAVVSLHSAASITATPSLLGTKGEDTQWVTVDIDYPEPSADDWVGVFSPAKLNSSTCPPVSDPREEIPYICSAPVKFQFLNYSNSHYTKTGKGSLKFQLINQRADFSFALFSGGLLNPKLVAVSNFISFVNPKVPLYPRLAQGKSWDEMTVTWTSGYHINEAIPFVEWGSEGKTQVQSPAGTLTFGRNSMCGSPARTVGWRDPGFIHTSFLKNLWPNLVYTYRLGHLLSNGSYVWSKKYSFKSSPYPGQDSLQRVIIFGDMGKAERDGSNEYNAYQPGSLNTTDQLIKDLENIDIVFHIGDITYANGYISQWDQFTAQVEPIASTVPYMIASGNHERDWPNTGSFYDTTDSGGECGVLAQNMFFVPADNRANFWYATDYGMFHFCIADSEHDWREGTEQYKFIEHCLATVDRQKQPWLIFVAHRVLGYSSNSWYAMEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPIYQNQCVNDERSQYSGVVNGTIHVVAGGAGSHLSDFSEVIPKWSLYRDYDFGFVKLTAFNHSSLLFEYKKSSDGKVYDSFTVSRDYKDVLACVHDGCEATTSAT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00522 625 Pfam Fn3-like domain from Purple Acid Phosphatase 59 178 IPR040974 -
Vimu7g00522 625 SUPERFAMILY Purple acid phosphatase, N-terminal domain 159 292 IPR008963 GO:0003993|GO:0046872
Vimu7g00522 625 SUPERFAMILY Metallo-dependent phosphatases 300 607 IPR029052 -
Vimu7g00522 625 Pfam Calcineurin-like phosphoesterase 301 516 IPR004843 GO:0016787
Vimu7g00522 625 PANTHER PURPLE ACID PHOSPHATASE-RELATED 29 609 - -
Vimu7g00522 625 CDD MPP_PAPs 300 605 IPR041792 -
Vimu7g00522 625 Pfam Purple acid Phosphatase, N-terminal domain 187 289 IPR015914 GO:0003993|GO:0046872
Vimu7g00522 625 Pfam Iron/zinc purple acid phosphatase-like protein C 541 600 IPR025733 -
Vimu7g00522 625 Gene3D - 295 609 IPR029052 -
Vimu7g00522 625 Gene3D - 182 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00522 Vimu-Chr7 5426669 5432407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00522 50 600 Miscellaneous Gene Families AT1G13900 31.086 3.66e-67 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00522 K22390 - gmx:100814531 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00522 7 5426669 5432407 Vimu11g04966 11 68980777 68982162 ECH
Vimu7g00522 7 5426669 5432407 Vimu7g00522 7 5426669 5432407 ECH