Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00521 ATGGCACGACCCATTTCTCATGTCTTATTTTCACTTGTTCTTTGCATTCTGCTGCAAGATCATATCCAAGCACTCAGACAGGCAAACTCTATTGTTCAACAATTTCTAGTTTTTAGCATTGAAAATGATTTCAAGCTTCTTTCGTACATTGTATACTTAGGATCACATTCTTTTGGTCCAAATCCTTCTTTGGTTGATCTTGAATCTGTCACAGACTCTCACCATGATTTTCTTGGATCTTACGTGGGAAGCATCGAAAAGGCCAAGGAAGCAATCTTTTATTCTTATAATAGATATATCAATGGGTTTGCTGCAGTACTTGAGGAAGATGAAGCAGCAAATATTGCAAAGCATCCCAGTGTCATATCAGTTTTCTTAAACAAAAGGCATAAATTGCACACAACACACTCCTGGAACTTCCTTGGGTTAGAAAGAAATGGTGCATTTCCACCTCAGTCACTATGGGGGAAGACTAAGGGTGAAGATGTCATTATTGGAAATATCGATACAGGCTACGAGTCAAGTATTGGTAAAAAACTGAATGCGTCGATGGTTAGTGCACGCGACTACGGAGGTCATGGTTCACATACTTTATCAACAGCTGGTGGTAACGCTGTTCCTGGAGCTAATGTTTTTGGGTTTGGGAATGGAACTGCGAGTGGTGGATCACCAAAAGCTCGAGTTGCAGCCTACAAGGCGTGCTGGCCTCCGGGATGTACTGATGCAGATATTGTTGCTGCTTTTGAGGCTGCCATAAGTGATGGTGTGGATGTGATTACCATGTCTGTGGGTTCAGAAAATCCACCTGAGTTTTTTGAAAGTGGTATATCTATAGGGTCCTTCCATGCAGTTTCCCACGGCATAACATTCGTGGCTTCTGGAGGAAATGGAGGACCTATTCAAGGATCTGTGTCCAACAATGAACCGTGGACTCTCACAGTTGGAGCAAGCACAATCGACAGAGACTTCGTTAGTAATGTTATACTTGGTAACGGGAAAATCTTCGAGGGAGCTAGCCTTTCAAGATCTGGCTTACCATCTAACAAGAAGTACCCATTGATCACCTCTGAACAAGCACTAACTACATCGGAATCATCTTCTGTTAACGCCTTTTTTTGCACGAATGGCACTCTTGATGCTAGGAAGGTGAAGGGTAAGATATTGGTGTGTCTTCGCGGCGTAAATGGTAGAGTAGAGAAGGGTGTTGTAGCTGCTAGTTTAGGAGCTGTTGGAATGATTCTGGCTAATCGTGGGGCCTTAGGTGATGAAATTATGTCCGATCCCCATGTGCTTCCTGCTACACATGTAAACTTTGAGACTGGCAAATACATTTTTAGTTACATCAACCGTACCAAGTCTCCCGTGGCTTATATTTCTAGAGTGAGAACAAAACTGGGTACGAAGCCAGCTCCAGTTATGGCTGCATTTTCATCAAGGGGTCCCAATCTCCTCGACCCAGCAATCCTCAAGCCTGATATCACTGCACCAGGAGTCAATATCATTGCTGCTTATACTGAAGCCTTAGATCCCACAAAACCTGACCAAACAATAACTCCTTACATTGCATTGTCTGGCACCTCAATGTCGTGTCCTCATGTTGCTGGTGTTGTTGGATTGCTCAAAGCCCTCCATCCTAATTGGAGCCCAGCTGCTATTAAGTCAGCAATCATTACCTCAGCAACTACAAAAGATAACTCTGGAAGGCGTATCCGAGCTTCACCATTGAAGGAGTCAACACCATATGACTTAGGTGCAGGCCACATTCGACCTAATCCTGCTGCATACCCTGGACTTATATATGACCTAAATACTACTGATTATTTAAACTATTTGTGTGGTCGTGGCTACGACAGTTCCCGGCTTATGTTGTTCTACGGCAAGCCTTTCACTTGTCCGAAGTCCTTCAGTTTAGCAGATTTCAATTACCCAACAATCACGATTCCTCGGATTGAGTATGGACAATCTGTGACTGTTTCTCGAACAGTTACAAATGTTGGGTCCCCAAGCGTGTATAGAGTTCGCATTGAGGCGCCACCAAATGTTACAGTTTCTGTTGATCCAGCGAAACTGAAATTCAAGGAAAAGGGTGAGAAAAAAGTGTTTCGAGTTTCATTGACCTTGAAGTCCAAAACTGAGAACACCACTGATTTCGTATATGAGTATGGGTCGTTGACATGGACTAATCACAAGAACCGCGTTAGGAGTCCAATTGTAGTTGTCTTGAATAGTTTCTGA 2235 0.4327 MARPISHVLFSLVLCILLQDHIQALRQANSIVQQFLVFSIENDFKLLSYIVYLGSHSFGPNPSLVDLESVTDSHHDFLGSYVGSIEKAKEAIFYSYNRYINGFAAVLEEDEAANIAKHPSVISVFLNKRHKLHTTHSWNFLGLERNGAFPPQSLWGKTKGEDVIIGNIDTGYESSIGKKLNASMVSARDYGGHGSHTLSTAGGNAVPGANVFGFGNGTASGGSPKARVAAYKACWPPGCTDADIVAAFEAAISDGVDVITMSVGSENPPEFFESGISIGSFHAVSHGITFVASGGNGGPIQGSVSNNEPWTLTVGASTIDRDFVSNVILGNGKIFEGASLSRSGLPSNKKYPLITSEQALTTSESSSVNAFFCTNGTLDARKVKGKILVCLRGVNGRVEKGVVAASLGAVGMILANRGALGDEIMSDPHVLPATHVNFETGKYIFSYINRTKSPVAYISRVRTKLGTKPAPVMAAFSSRGPNLLDPAILKPDITAPGVNIIAAYTEALDPTKPDQTITPYIALSGTSMSCPHVAGVVGLLKALHPNWSPAAIKSAIITSATTKDNSGRRIRASPLKESTPYDLGAGHIRPNPAAYPGLIYDLNTTDYLNYLCGRGYDSSRLMLFYGKPFTCPKSFSLADFNYPTITIPRIEYGQSVTVSRTVTNVGSPSVYRVRIEAPPNVTVSVDPAKLKFKEKGEKKVFRVSLTLKSKTENTTDFVYEYGSLTWTNHKNRVRSPIVVVLNSF 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00521 744 Gene3D Peptidase S8/S53 domain 181 607 IPR036852 GO:0004252|GO:0006508
Vimu7g00521 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 172 IPR045051 -
Vimu7g00521 744 Pfam Fibronectin type-III domain 639 739 IPR041469 -
Vimu7g00521 744 Gene3D - 611 741 - -
Vimu7g00521 744 Pfam PA domain 372 443 IPR003137 -
Vimu7g00521 744 Pfam Peptidase inhibitor I9 48 133 IPR010259 -
Vimu7g00521 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Vimu7g00521 744 SUPERFAMILY PA domain 369 451 IPR046450 -
Vimu7g00521 744 SUPERFAMILY Subtilisin-like 132 597 IPR036852 GO:0004252|GO:0006508
Vimu7g00521 744 Pfam Subtilase family 186 563 IPR000209 GO:0006508|GO:0008236
Vimu7g00521 744 FunFam Subtilisin-like protease SBT1.5 611 742 - -
Vimu7g00521 744 CDD PA_subtilisin_like 326 458 - -
Vimu7g00521 744 Gene3D - 320 465 - -
Vimu7g00521 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 40 133 IPR037045 -
Vimu7g00521 744 ProSiteProfiles Serine proteases, subtilase domain profile. 137 594 - -
Vimu7g00521 744 FunFam Subtilisin-like protease SBT5.3 39 133 - -
Vimu7g00521 744 PRINTS Subtilisin serine protease family (S8) signature 160 179 IPR015500 -
Vimu7g00521 744 PRINTS Subtilisin serine protease family (S8) signature 189 202 IPR015500 -
Vimu7g00521 744 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Vimu7g00521 744 FunFam subtilisin-like protease SBT1.5 320 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00521 Vimu-Chr7 5418547 5422670 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00521 48 743 Subtilisin-like Serine Gene Family AT5G59810 52.477 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00521 - - vun:114175516 1222.99