Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00519 ATGACTTACCGGTCAGAACAAGAAACCGTTCGGTTTGAATCGGAGCTCCCTACGCGTGCACGTGACAATGAAGGCCATGGTTCACATACTCTGTCAACAGCTGGTGGTAGCTTTGTTCCTGGAGCTAGTGTTTTTGGCTTTGGAAATGGAGCAGCAAGTGGTGGATCACCAAAGGCTCGAGTTGCAGCATATAAGGTGTGTTGGCCAAATCTTATCCCGTTCGGTGGTGGATGTTTTGATGCAGACGTTATGGCTGCTTTTGAGGCAGCCATAAGTGACGGGGTTGATGTGCTTTCAGTGTCTTTGGGATCGGAGGCCCGAGATTATTTCGAAGACGTTATTGCCATAGGATCCTTCCATGCAGTTGCAAATGGTATTGTAGTAGTGGCTTCTGCAGGAAATTCAGGACCTTTTCCTGAATCTGTATCCAACGTTTGGACCATGGATGCTAACAACTTCGCTAGTTATGTTACACTTGGTGACAAGAAAATCATCAAGGGAGGTAGCCTTTCAGAGTATGGATTATCATCTGATAAGGCGTACCCATTGATTAGTTCTGTTGATGCCAAATATTTCAATGGATCTATTTCGGAAGCGATGGAAGTCTTGATCCTGAGAAGGATTCACATCATAGCTGCTTATACTGAAGCCGTATCTGCTACAGGTCTAGAATCTGACACACGCATAACTCCTTTCTTTTCCATGACTGGCACTTCAATGTCATGTCCTCATGTTGCTGGCCTTGCTGGGCTGCTCAAAGCCCTTCATCCTGATTGGAGCCCAGCTGCTATAAAGCAACTCCATTTGACTATGGCAGGGCATATTAAACCTAACAGTGCTGTGGACCCTGGACTTGTGTATGACCTGAATATTACTGATTTTTTGAACTATTTTTCCCAGCTTAAGATGTTCGACCACAAGCCTTACACTTGTCCAGAGTCGTTCAGTTTAGCAGATTTCAATTATCCAACAATCACAATTTCTGAGTTTGGCCCTGGAAATTCTGTGAATGTCTCTCGAACTGTCACTAATATTGGGTCCGGAAGCACTTATACAGTGCGCATAAAAGCGCCACCACATGTTGAAGTTTGGGTGGAGCCTAGGAAACTGAGGTTCAAGAAAAAGGGTGAAAAGAAGGAGTTCAGAGTGGCATTGACCTTGAAGAAGAAAACTGAAAGCACCACTGATTTCGTATTCGGATGGTTGACGTGGACTAATAAGAAGCACCATGTTAGGAGTTCCATTGCAGTTAACATGACACAGTCTATTCACGGGGTTTGTTGGATAAGGTCTAACGATGTGATTGGATTGCCAGTTCCCAGATAA 1326 0.4457 MTYRSEQETVRFESELPTRARDNEGHGSHTLSTAGGSFVPGASVFGFGNGAASGGSPKARVAAYKVCWPNLIPFGGGCFDADVMAAFEAAISDGVDVLSVSLGSEARDYFEDVIAIGSFHAVANGIVVVASAGNSGPFPESVSNVWTMDANNFASYVTLGDKKIIKGGSLSEYGLSSDKAYPLISSVDAKYFNGSISEAMEVLILRRIHIIAAYTEAVSATGLESDTRITPFFSMTGTSMSCPHVAGLAGLLKALHPDWSPAAIKQLHLTMAGHIKPNSAVDPGLVYDLNITDFLNYFSQLKMFDHKPYTCPESFSLADFNYPTITISEFGPGNSVNVSRTVTNIGSGSTYTVRIKAPPHVEVWVEPRKLRFKKKGEKKEFRVALTLKKKTESTTDFVFGWLTWTNKKHHVRSSIAVNMTQSIHGVCWIRSNDVIGLPVPR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00519 441 Gene3D - 295 420 - -
Vimu7g00519 441 MobiDBLite consensus disorder prediction 8 26 - -
Vimu7g00519 441 Gene3D Peptidase S8/S53 domain 17 149 IPR036852 GO:0004252|GO:0006508
Vimu7g00519 441 Gene3D Peptidase S8/S53 domain 209 294 IPR036852 GO:0004252|GO:0006508
Vimu7g00519 441 Gene3D - 150 193 - -
Vimu7g00519 441 MobiDBLite consensus disorder prediction 1 32 - -
Vimu7g00519 441 Pfam Subtilase family 18 274 IPR000209 GO:0006508|GO:0008236
Vimu7g00519 441 PRINTS Subtilisin serine protease family (S8) signature 22 35 IPR015500 -
Vimu7g00519 441 PRINTS Subtilisin serine protease family (S8) signature 236 252 IPR015500 -
Vimu7g00519 441 Pfam Fibronectin type-III domain 319 417 IPR041469 -
Vimu7g00519 441 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 191 IPR045051 -
Vimu7g00519 441 ProSitePatterns Serine proteases, subtilase family, serine active site. 237 247 IPR023828 -
Vimu7g00519 441 ProSiteProfiles Serine proteases, subtilase domain profile. 1 293 - -
Vimu7g00519 441 SUPERFAMILY Subtilisin-like 18 280 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00519 Vimu-Chr7 5405756 5409555 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00519 208 420 Subtilisin-like Serine Gene Family AT5G59810 41.057 3.63e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00519 - - lja:Lj4g3v1388200.1 360.533