Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00500 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGTCACAGATTGAGGAGCGAAGCACCAGCACCGTTTCAAGCCTGCCATTTTCCGCGACCTTCCATGAGCACGCAGAGGTTGGATTTGCCATGTTCTACTTTCACCCGCAAAGACAGCTCTTCACGCTCGCAGCCCCTCAGGCCAGTGGGGCTCTCGGTGGAGAAACCCATAGAAGCCAAGACCAGCACATGTTCTCTCAAGCACAACATTCGACTCCCACCTTTGGCCATCACAGCGCCAACACCATTGGTGGAAGAGTCCATCAAGGACAAGAGTTTGAAAAGGCTCGCGGAGCACGACGAGTCCTTCACCAACGTACCCAAGAGGAAAAAGGGTATCACGGAGTGTGACAATTCCGGTGATAACTTCTGGTTTCAGCCTGGCGTTGAGGGTAACACTTTAGGAGGGCTTAACAACACTTCACTTGCTTTCTCCCCGGAGGAAGAGACGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATTCTGCCCCTTTTCCCTTAAACCCGTGGCTGGAATCATGTGTAACAAAGATCACCAACTTCGGTGAGGGTAGCCACCGTCCTCGCCAGCATCATAACGACCATGCAACTGAAGGGTCGGTCTCCAACGCTTCTTCTGAGAGCCAAAGCCTGAGGCTAAACGAGAACGCGTCAGAACATGAAGTGGGAAACGGTTCGGGAAATCCTTACCATCACCACGAGGTGGAGACAGGGGAAGAAGATGATCATCACGGGTTGGAACTCGTTAGCTTGCTCACTGGCTGCGTGGATGCCATTGGATCAAGAAACGTAGCTGCTATAAACCAGTTCATCGCAAAATTAGGCGATCTTGCTTCTCCAAGGGGAACCCCCATAAGCCGCATATGCGCTTATTTCACTGAAGCCTTGGCCATCAGAGTAACAAGGCTTTGGCCTCATGTTTTTCACATCACCACAACTTCCCGAGACATGGTGGAGGATGACGAAACCGGAACTGCACTGAGGCTTCTCAACCAGGTGACCCCAATTCCCAAGTTTATCCATTTCACATCAAACGAGATGCTGCTGAGGGCGTTTGAAGGAAAAGACAGAGTTCACATAATAGACTTCGACATCAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGCCTAGCGTCGAGAACACACCCTCCGAGTCACGTGAGAATCACGGGAATAGGAGAATCAAAGCAAGAGCTAAACGAAACCGGAGACAGACTCGCGGGCTTCGCGGAAGCGCTGAACCTCCCCTTCGAGTTCCACCCCGTCGTGGACAGACTCGAAGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCAGGAAACAGTGGCCGTGAACTGCATTTTGCAGCTGCACAAGACGCTTTACGACGGAAGCGGAGGAGCTTTGAGGGACTTCTTGGGACTGATCCGCAGCACGAATCCAAGCGTGGTGGTGGTGGCCGAACAGGAAGCAGAACACAACGAGGCAAGGTTGGAAGCAAGGGTGTGCAAGTCGTTGAAGTATTACTCAGCGTTGTTCGATTGCATCGAGGAGAGTGGAGTGGCGCAAGAGAGTGCAGTGAGGGTGAAGATAGAGGAGATGTACGGGAGAGAGATAAAAAACATGGTGGCATGTGAAGGGAGGGAGAGGTTAGAGAGACACGAGAGTTTCGGGAAGTGGAGGAGGATGCTGGTGGAGCAAGGAGGGTTGAGATGTTTGGGAGTTTCTGAGAGGGAAATGAATCAGAGCCAGTTGTTGTTGAAGATGTATTCTTGTGAGAGTTACAGTATAAAGAAGGTGGAGATTGAAGGAGCAACAGGAGTTATTCTTAGTTGGCTGGAGCAACCTTTGTACACTGTTTCAGCTTGGGTTCCTGTTGATGTTGCGGGTACCTCGTCCTCTTTTTCTCACCCAACTTGA 1941 0.5116 MLAGCSSSTLLSPSHRLRSEAPAPFQACHFPRPSMSTQRLDLPCSTFTRKDSSSRSQPLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAPTPLVEESIKDKSLKRLAEHDESFTNVPKRKKGITECDNSGDNFWFQPGVEGNTLGGLNNTSLAFSPEEETVCFVPSEVVSHSAPFPLNPWLESCVTKITNFGEGSHRPRQHHNDHATEGSVSNASSESQSLRLNENASEHEVGNGSGNPYHHHEVETGEEDDHHGLELVSLLTGCVDAIGSRNVAAINQFIAKLGDLASPRGTPISRICAYFTEALAIRVTRLWPHVFHITTTSRDMVEDDETGTALRLLNQVTPIPKFIHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTHPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEQETVAVNCILQLHKTLYDGSGGALRDFLGLIRSTNPSVVVVAEQEAEHNEARLEARVCKSLKYYSALFDCIEESGVAQESAVRVKIEEMYGREIKNMVACEGRERLERHESFGKWRRMLVEQGGLRCLGVSEREMNQSQLLLKMYSCESYSIKKVEIEGATGVILSWLEQPLYTVSAWVPVDVAGTSSSFSHPT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00500 646 MobiDBLite consensus disorder prediction 195 255 - -
Vimu7g00500 646 ProSiteProfiles GRAS family profile. 252 631 IPR005202 -
Vimu7g00500 646 MobiDBLite consensus disorder prediction 210 236 - -
Vimu7g00500 646 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 217 626 IPR005202 -
Vimu7g00500 646 Pfam GRAS domain family 261 630 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00500 Vimu-Chr7 5270924 5272864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00500 1 631 GRAS Transcription Factor Family AT1G63100 56.332 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu7g00500 GRAS 1.5e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00500 - - gmx:100786173 1023.08