Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu7g00472 | ATGGATTCCTTCTTTCTCGTTGTTCTAACCTTTGTCTTCAGCTTCCATATTCATTTTGCTCAAGCAAATCAACAACCTTCAACCGCCACCACTTCAAAAACATATATTATCCATGTGAAGGGCCCAAAGGGTACCACACTTGCTCAATCAGAAGATGTAGAGAGCTGGCATAATTCATTCATGCCACCAACTACTACTATGAGCTCAGAGGATCAACCACGAATGATCTATTCATACCGGAAAGTCATCAGTGGCTTTGCTGCAACACTCACTGAACAAGAGCTGAGAGAAGTGGAAAAAAAAGATGGCTTTATCTCTGCTCACCCCGAAAGGATGCTGCATCGTCAAACTACACATACCCCACAATTTTTGGGGTTGAAGCGACAAATGGGACTGTGGAAGGAATCAAACTTTGGAAAGGGAGTAATTGTTGGGGTGCTGGATTCTGGAATCACGCTTAACCATCCTTCATTCAGTGATGCAGGAATGCCACCACCACCACCCAAATGGAAAGGGAGATGCGAGCTTAATGGAACAGCATGTAACAATAAACTAATTGGAGCAAGGTCTTTCAACCTCGCTTCAGAGACAACGAAAGAAGCAGTGACACCAATTGATGAAGATGGACATGGGACTCACACAGCGAGCACTGCAGCTGGTGCTTTTGTTGATAATGCACAAGTACTAGGAAATGCCAAAGGTACTGCAGCAGGGATTGCCCCTCATGCTCACCTGGCAATTTACAAAGTATGTTTTGGAGAAGCCTGCCCAGAAAGCAGTGTATTGGCCGCATTGGATGCAGCTGTGGAGGATGGCGTGGATGTAATATCAATATCCCTTGGTCTAAACGAGCCACCTCCCTTTTTCAATGATAGCACCGCAATAGGCACGTTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTGCAGCAGGGAACTCTGGTCCCCTTCACGGCTCCTTAGTTAATGGCGCGCCTTGGATCCTCACAGTCGGAGCAAGCAATATTGACAGAAGCATTGTAGCAACAGCCAAGCTAGGAAATGGACAAGAATTTGATGGGGAATCTGTTTTCCAGCCTTCCGACTTTTCTCCAACACCGCTGTTCCTAACATATGCTGGAAAGAATGGCAAACAACAAGCCGCCTTATGTGCCAATGGATCCTTGAATGATGTTGATTTTAGAGGCAAGATTGTTTTGTGTGAGAGAGGAGGTGGGATAGCAAGAATCGCCAAAGGAGAGGAAGTTAAAAGAGCAGGTGGTACAGCCATGATTCTCATGAATGATGAAAGAAATGGTTTCAGTCTCTCAGCTGATGTGCATGCTCTAACAGCAACACATGTAAGCTATGATGCTGGAGTTAAGATTAAAGCCTATATAAATTCAACTGAAACACCTACAGCTACCATTTTATTCAAGGGAACTGTAATAGGAAACTCCCTATCTCCGGCCGTTTCATCCTTCTCCTCAAGAGGTCCCAACTTGCCCAGTCCTGGTATTTTGAAACCAGACATCATAGGACCAGGCGTCAACATCCTAGCTGCCTGGCCATTCCCCCTTAACAACAGTACTGATTCAAAATCCACTTTCAACATCATGTCCGGCACATCGATGTCATGCCCACATCTTAGTGGCGTAGCCGCTTTGCTCAAAAGCTCTCATCCCGACTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACATAATCAACCTTGAAAACAAACTCATTGTTGATGAAACACTTCACACAGCAGATGTCTTTGCCGCAGGTTCTGGCCACGTGAATCCCTCAAGAGCAAATGACCCCGGGTTAGTTTATGATATCACGCCAGATGATTATATACCTTATCTCTGTGGTTTAGGCTACAGCGATACAGAGGTTGGGATCATTGCACATAAAACAATTAAGTGCTCTGAGACTTCAAACATTCTCGAAGGAGAGCTCAACTATCCCTCATTTTCTGTGGTGCTTGGTTCCCCAAAAACATTCACAAGGACTGTAACAAATGTAGGTGAGGCCAACTCGTCTTATGTTGTCCATGTTACAGCGCCAGAAGGGGTCAATGTGAAGGTCCAGCCAGATATACTGAACTTTTCAGAAGCAAACCAGAAACAGAAATATTCAGTGTCATTCAGCCGCATAGATTCGGGTAATGAAACTGGGGAATATGCTCAAGGGTTTTTACAATGGGTCTCTGCCAAACACACTGTAAGGAGTCCGATCTTAGTCAACTTTGTGTAA | 2253 | 0.4487 | MDSFFLVVLTFVFSFHIHFAQANQQPSTATTSKTYIIHVKGPKGTTLAQSEDVESWHNSFMPPTTTMSSEDQPRMIYSYRKVISGFAATLTEQELREVEKKDGFISAHPERMLHRQTTHTPQFLGLKRQMGLWKESNFGKGVIVGVLDSGITLNHPSFSDAGMPPPPPKWKGRCELNGTACNNKLIGARSFNLASETTKEAVTPIDEDGHGTHTASTAAGAFVDNAQVLGNAKGTAAGIAPHAHLAIYKVCFGEACPESSVLAALDAAVEDGVDVISISLGLNEPPPFFNDSTAIGTFAAMQKGIFVSCAAGNSGPLHGSLVNGAPWILTVGASNIDRSIVATAKLGNGQEFDGESVFQPSDFSPTPLFLTYAGKNGKQQAALCANGSLNDVDFRGKIVLCERGGGIARIAKGEEVKRAGGTAMILMNDERNGFSLSADVHALTATHVSYDAGVKIKAYINSTETPTATILFKGTVIGNSLSPAVSSFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLNNSTDSKSTFNIMSGTSMSCPHLSGVAALLKSSHPDWSPAAIKSAIMTSADIINLENKLIVDETLHTADVFAAGSGHVNPSRANDPGLVYDITPDDYIPYLCGLGYSDTEVGIIAHKTIKCSETSNILEGELNYPSFSVVLGSPKTFTRTVTNVGEANSSYVVHVTAPEGVNVKVQPDILNFSEANQKQKYSVSFSRIDSGNETGEYAQGFLQWVSAKHTVRSPILVNFV | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu7g00472 | 750 | Gene3D | Peptidase S8/S53 domain | 141 | 617 | IPR036852 | GO:0004252|GO:0006508 | |
| Vimu7g00472 | 750 | FunFam | subtilisin-like protease SBT1.5 | 337 | 477 | - | - | |
| Vimu7g00472 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 115 | IPR037045 | - | |
| Vimu7g00472 | 750 | CDD | PA_subtilisin_like | 343 | 470 | - | - | |
| Vimu7g00472 | 750 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 144 | 155 | IPR023827 | - | |
| Vimu7g00472 | 750 | Pfam | Subtilase family | 139 | 574 | IPR000209 | GO:0006508|GO:0008236 | |
| Vimu7g00472 | 750 | CDD | Peptidases_S8_3 | 113 | 571 | IPR034197 | - | |
| Vimu7g00472 | 750 | Gene3D | - | 621 | 749 | - | - | |
| Vimu7g00472 | 750 | Gene3D | - | 337 | 478 | - | - | |
| Vimu7g00472 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 123 | 604 | - | - | |
| Vimu7g00472 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 141 | 381 | - | - | |
| Vimu7g00472 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 139 | 158 | IPR015500 | - | |
| Vimu7g00472 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 534 | 550 | IPR015500 | - | |
| Vimu7g00472 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 206 | 219 | IPR015500 | - | |
| Vimu7g00472 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 621 | 750 | - | - | |
| Vimu7g00472 | 750 | Pfam | PA domain | 382 | 455 | IPR003137 | - | |
| Vimu7g00472 | 750 | SUPERFAMILY | Subtilisin-like | 116 | 608 | IPR036852 | GO:0004252|GO:0006508 | |
| Vimu7g00472 | 750 | SUPERFAMILY | PA domain | 386 | 464 | IPR046450 | - | |
| Vimu7g00472 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 57 | 746 | IPR045051 | - | |
| Vimu7g00472 | 750 | Pfam | Peptidase inhibitor I9 | 34 | 114 | IPR010259 | - | |
| Vimu7g00472 | 750 | Pfam | Fibronectin type-III domain | 651 | 747 | IPR041469 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu7g00472 | Vimu-Chr7 | 5020910 | 5023162 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vimu7g00472 | 4 | 749 | Subtilisin-like Serine Gene Family | AT1G04110 | 44.005 | 0.0 | 603 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu7g00472 | - | - | gmx:100785376 | 1282.7 |