Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00460 ATGTTCACCCTCTCAACATTGCTTCTACTTTTCTGTGTCATTTCTACACTTATTTGCTACGCATGGCTTTACTTCTTCAAACCCAACACTCAGAGGCTTCCACCGGGCCCATCGGGCCTCCCTTTCCTCGGGAACCTTCTATCTCTTCAACCGGAGCTTCACACTTACTTCGCCGCCTTGGCCCAGATCCACGGCCCAATTTACAAGCTCCGACTCGGGAGCAAGCTCGCCATCGTCATAGCTTCACCGGCCGTGGCTCGCGAGATCTTGAAAGACAACGACACTGTTTTCGCCAACCGCGACGTCCCAGCCGCCGGGAGGGTTGCCACCTACGGCGGTTTTGACATAGCGTGGACACCCTACGGAGCCGAATGGCGAATGCTGAGGAAAGTCTGCACTGTGAAAATGTTGAGCAACGCCACCCTGGACTCCGTGTACGATCTGCGGCGCAACGAGGTGCGTAAAACGGTGTCGTATTTGTACAGCCGAGCGGGGAGTGCGGTGAACGTGGGGGAGCAGGGGTTTCTGACGGTGATGAATGTGATAACTAGTATGATGTGGGGCGGGGCGGTGGAAGGGGCGGAGAGGGAAACTTTGGGAGCGGAGTTCAGGGAGTTGGTGGCGGAGACGACGCAGCTTCTGGGGAAGCCGAATGTGTCGGATTTTTTTCCCAGGTTGGCGCGGTTCGATTTGCAAGGTGTGGAGAAAGAGATGCAGGTGTTGTTGTCACGGTTCGATGGGATATTTGAAAAGATGATTGGTGAGCGAGTGAAGGTGGGTGAAGAAAAAGATGGGAAGAAGAAAGAAAGAAAGGATTTTCTGCAGTTTCTGTTGGATCTTAAGGATTCCGAAGATGTTGATTCGAAGACGCCATTCACCATGACTCACCTCAAGGCCATACTCATGGATATGATTACAGGGGGAACCGATACATCGTCCAACACAATTGAATTTGCAATGGCAGAAATAATGCAGAAAGAAGAGGTAATGAAGAGAGTGAAAGAAGAGTTGGAAGTGGTGGTCGGAAAAGATAACATGGTAGAAGAGTCTCATATTCATAAGTTGCATTACTTGAAAGCTGTGATGAAAGAAACTCTTCGGTTGCATCCTGCACTTCCACTTCTAATCCCACATAGCCCCAGTGAAAGCACCAATGTGGGAGGCTACACAATCCCAAAGGGTTGTCGAGTGTTCGTGAATGTTTGGGCCATTCATAGAGATCCTTCGATTTGGGAAAGACCAGTGGAATTTGAGCCTTCAAGGTTCTTAGATGGAAAGTGGGATTTCAGTGGCAATGACTTCAGTTATTTCCCCTTTGGATCTGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAGAACAGTTCTGTATCTTCTTGCAACACTTATACACTTATTTGATTGGAGAATACCAGAAGGAGAGAGGTTAGATGTATCAGAGAAATTTGGTATTGTTCTAAAAAAGAAAACACCTCTTGTTGCCATCCCCACCCCGCGCTTCTCCAACCCACACCTTTACAGTTTAATATAA 1533 0.4853 MFTLSTLLLLFCVISTLICYAWLYFFKPNTQRLPPGPSGLPFLGNLLSLQPELHTYFAALAQIHGPIYKLRLGSKLAIVIASPAVAREILKDNDTVFANRDVPAAGRVATYGGFDIAWTPYGAEWRMLRKVCTVKMLSNATLDSVYDLRRNEVRKTVSYLYSRAGSAVNVGEQGFLTVMNVITSMMWGGAVEGAERETLGAEFRELVAETTQLLGKPNVSDFFPRLARFDLQGVEKEMQVLLSRFDGIFEKMIGERVKVGEEKDGKKKERKDFLQFLLDLKDSEDVDSKTPFTMTHLKAILMDMITGGTDTSSNTIEFAMAEIMQKEEVMKRVKEELEVVVGKDNMVEESHIHKLHYLKAVMKETLRLHPALPLLIPHSPSESTNVGGYTIPKGCRVFVNVWAIHRDPSIWERPVEFEPSRFLDGKWDFSGNDFSYFPFGSGRRICAGIAMAERTVLYLLATLIHLFDWRIPEGERLDVSEKFGIVLKKKTPLVAIPTPRFSNPHLYSLI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00460 510 Coils Coil 316 336 - -
Vimu7g00460 510 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PANTHER OS08G0547900 PROTEIN 6 507 - -
Vimu7g00460 510 FunFam Cytochrome P450 - like protein 23 494 - -
Vimu7g00460 510 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 CDD CYP76-like 61 497 - -
Vimu7g00460 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vimu7g00460 510 Gene3D Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00460 510 SUPERFAMILY Cytochrome P450 34 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00460 Vimu-Chr7 4918557 4921892 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00460 2 507 Cytochrome P450 AT4G12320 58.350 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00460 - - vra:106769527 793.882