Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00452 ATGAAAGGTATTGGTTATTTGCACAACAACGAAACAAGCAAGCCTACCATAGTACACCAAAACGTTTCAGTTGAAAAGGTTATTCTAGACCATGAATTTAACCCCTTGATCATGGATGCTGGCCTCCCTAAGCTTCTTGCAGATGATGTAGTTTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATACCTTGCACCAGAATATATTACTACTGGGCGATTTACTGAGAAGAGTGACATATATGCTTTTGGGGTCATTGTCCTTCAAGTTCTATCTGGAAAGGCATTGGTGGGGGGTTCGATCCGGGTTGCAGTTGAAGCTTTTAGATTTGAAGATTTTGTTGACACAAATCTGAAGGGAAATTATTCTAAGTCAGAAGCTGCAATTCTTTCAAAGCTTGCAATTATGTGCACCCATGAAGTGCCAGAGCAAAGGCCAACGATGGTGGAGGTGATTCAAGAGCTGGCCATGCTTCCTCTCCATTGTTCTTCATAA 495 0.4222 MKGIGYLHNNETSKPTIVHQNVSVEKVILDHEFNPLIMDAGLPKLLADDVVFSALKASAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKALVGGSIRVAVEAFRFEDFVDTNLKGNYSKSEAAILSKLAIMCTHEVPEQRPTMVEVIQELAMLPLHCSS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00452 164 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00452 164 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 155 - -
Vimu7g00452 164 SUPERFAMILY Protein kinase-like (PK-like) 2 158 IPR011009 -
Vimu7g00452 164 Pfam Protein tyrosine and serine/threonine kinase 2 155 IPR001245 GO:0004672|GO:0006468
Vimu7g00452 164 Gene3D Transferase(Phosphotransferase) domain 1 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00452 Vimu-Chr7 4873571 4874301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00452 2 155 Receptor kinase-like Gene Family AT1G53420 33.939 2.98e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Vimu7g00452 PK_Tyr_Ser-Thr 3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00452 - - gmx:100784155 289.271