Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00399 ATGGATCTTCAGATCTTTGATATGTTAGCTCCTATTGCCCTTTTCTTCCTGATGCTGGTGGCACTGAAATTGGGGAGGAATCTCACCAAAACCAAGCCAACTCCAAAGACACCTCCAGGGCCATGGAAGCTACCTATCATAGGAAACATACCTCATCTTGTTACACCAACACCACACAGAAAACTAAGAGACTTGGCCAAAAAATATGGAGCCTTGATGCATCTCCAACTTGGAGAGGTCTTCACTGTAGTTGTTTCCTCAGCAGAATGTGCCAAAGAGATAATGAAAACTCATGATCTTGTCTTTGCATCAAGGCCTCTGATTCTAGCCTCAAAGATAATCGGTTATGATGCCACAAACATATCTTTTTCCCCTTATGGAAATTATTGGAGACAGTTGAGGAAAATTTGCACAGCTGAGCTTTTCACTCCAAAACGTCTCAATTCTTTCAAGCCTATAAGAGAAGAAGAGCTCTCAAGACTCATCAAAATGATTGCTTCAGAAAATGGATCACCGTTCAATCTCTCTGAGGCACTTCTCACATCCAACTATGCAATAATTTCGAGGGCAGCTTTTGGCAAGACGTGCAAAGAGCAAGAAGAATATATATCAGTGGGAAAGGAAGTGCTTAAGGCTGCAGGAGGATTTGACATTGGAGATTTGTTTCCTTCTGCCACATGGCTCCAAAATTTTACTGGTTTGAGGCCTACCCTTGAGAGATTGCACCGAAAAAGTGATCAAATACTTGAAAACATCATGAGGGAGCACAAAGATAAAAGGTCAAAATCCAAAGAAGGTCTGGTTGAAGCAGAAGAGGACCTTGTAGATGTCCTTCTAAAATTTCAGGATGATAGTGGTGAAGATCAGGATATTTGCTTGACTGATGACAACATAAAGGCTATAATTGATAATATCTTTGCTGCTGGAGGTGAGACATCAGCAACTACCATAGATTGGACAATGGCAGAGATGATAAGGAATCCAAGGGTGATGAAGAGAGCACAGGCTGAAGTGAGAGAGGTATTCAAGATTAATGGAAGGGTTGATGAAACTTGCATCAATGAAATGAAATATTTGAAGTTAGTTATCAAAGAGACATTGAGGTTACACCCACCAGCTGTTTTACTTCCAAGAGAAAGCAGAGAAGAATGTGAGATTAATGGGTATTATATTCCAGTCAAAAGCAAGGTAATTGTGAATGTTTGGGCAATTGGAAGAGATCCAAACAGTTGGAGTGACCCAGAGAGGTTTTATCCTGAGAGATTCACTGATATCTCTGTTGATTACAAAGGGAATAATTTTGAGTTGATTCCATTTGGTGCTGGAAGAAGAATGTGCCCAGGTATGACATTTGGTTTGATGAATGTTGAACTCACACTTGCACTTTTGTTGTATCACTTTGATTGGAAGCTTCCTACTGCAATGAAAGCTGAGGAATTGGACATGACTGAGCAATTTGGATTAACTGTCAGAAGAAAAAATGGTCTGCTTTTGATTCCCTCCGTTGTAACACAATAA 1518 0.4025 MDLQIFDMLAPIALFFLMLVALKLGRNLTKTKPTPKTPPGPWKLPIIGNIPHLVTPTPHRKLRDLAKKYGALMHLQLGEVFTVVVSSAECAKEIMKTHDLVFASRPLILASKIIGYDATNISFSPYGNYWRQLRKICTAELFTPKRLNSFKPIREEELSRLIKMIASENGSPFNLSEALLTSNYAIISRAAFGKTCKEQEEYISVGKEVLKAAGGFDIGDLFPSATWLQNFTGLRPTLERLHRKSDQILENIMREHKDKRSKSKEGLVEAEEDLVDVLLKFQDDSGEDQDICLTDDNIKAIIDNIFAAGGETSATTIDWTMAEMIRNPRVMKRAQAEVREVFKINGRVDETCINEMKYLKLVIKETLRLHPPAVLLPRESREECEINGYYIPVKSKVIVNVWAIGRDPNSWSDPERFYPERFTDISVDYKGNNFELIPFGAGRRMCPGMTFGLMNVELTLALLLYHFDWKLPTAMKAEELDMTEQFGLTVRRKNGLLLIPSVVTQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00399 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 PANTHER OS08G0105600 PROTEIN 61 501 - -
Vimu7g00399 505 Coils Coil 253 273 - -
Vimu7g00399 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vimu7g00399 505 CDD CYP71-like 68 496 - -
Vimu7g00399 505 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00399 505 FunFam Cytochrome P450 71D8 30 500 - -
Vimu7g00399 505 Pfam Cytochrome P450 38 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00399 Vimu-Chr7 4397880 4399517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00399 12 501 Cytochrome P450 AT3G26300 43.800 5.71e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00399 - - gmx:100801936 706.827