Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00396 ATGGCCATGGACATATTTGGTGCTGGAGGTGAGACATCAGCAACTACAATAAACTGGGCCATGGCAGAAATGATTAGGGATCCAAGAGTATTGAAGAAAGCACAAGCTGAAGTGAGAGAGGTATTCAATATGAAAGGAAGGGTTGATGAATTATTCATGGATAAACTCAAATATTTGAAATCAGTTGTAAAAGAGACCCTAAGGTTGCACCCACCAGCTCCTCTTTTACTTCCAAGAGAATGTGGACAGACATGTGAGATTAAAGGGTACCATATACCAGTCAAAAGTAAGGTAATTGTGAATGCTTGGGCAATAGGAAGAGATCCAAAGCATTGGACTGATGAAGAAAGGTTTCATCCAGAGAGATTCACTGATAGCTCAATTAGCTACAATGGGGTTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGTCCAGGTATCACCTTAGGTTTAGTAAATGTTGAGCTGGCCCTTGCATTTTTGTTGTATCACTTTGATTGGACACTTCCAAATGGAACTAAAAGTGAAGACTTGGACATGTCTGAGAAGTTTGGAGTCACTGTTAGAAGAAAAGATGACCTATACTTGATACCACTGACTTCTAGTCCTTTCTTGGTATCATAA 633 0.3934 MAMDIFGAGGETSATTINWAMAEMIRDPRVLKKAQAEVREVFNMKGRVDELFMDKLKYLKSVVKETLRLHPPAPLLLPRECGQTCEIKGYHIPVKSKVIVNAWAIGRDPKHWTDEERFHPERFTDSSISYNGVNFEYIPFGAGRRICPGITLGLVNVELALAFLLYHFDWTLPNGTKSEDLDMSEKFGVTVRRKDDLYLIPLTSSPFLVS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00396 210 PRINTS E-class P450 group I signature 60 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS E-class P450 group I signature 147 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS E-class P450 group I signature 101 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS E-class P450 group I signature 137 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS E-class P450 group I signature 17 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 FunFam Predicted protein 6 199 - -
Vimu7g00396 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 140 149 IPR017972 GO:0005506|GO:0016705
Vimu7g00396 210 Pfam Cytochrome P450 2 190 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PANTHER OS08G0105600 PROTEIN 3 204 - -
Vimu7g00396 210 Gene3D Cytochrome P450 1 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS P450 superfamily signature 8 25 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS P450 superfamily signature 147 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS P450 superfamily signature 61 72 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 PRINTS P450 superfamily signature 138 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00396 210 SUPERFAMILY Cytochrome P450 2 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00396 Vimu-Chr7 4386213 4387399 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00396 3 201 Cytochrome P450 AT3G26300 54.774 4.78e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00396 - - gmx:100814157 364.77