Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00395 ATGGAGTCTCAACCACTTCACAAGTTTGGCCTTGCAATATCCTTTTTCCTCTTCATGATTCTGGCACTCAAAATAGGGACCAATCTCAAGAAAACTGAGTCATCTCAAAAAATACCACCAGCACCATGGAAGCTACCTGTCATAGGAAACATACACAATCTTCTTTCATCTGCACCACACAGAAAATTAAGAGACTTGGCCAAAATATATGGTCCCTTGATGCGTCTCCAACTTGGGGAGGTGTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACGCATGATCTCATCTTTGCATCAAGGCCTACAATTCTAGCTTCTGATATAATGGCTTATGATTCCACTGATATTATGTTTTCACCTTATGGAAAATATTGGAGACAGCTGAGAAAAATATGCACACTGGAGCTTTTCACTCACAAGCGTGTCAACTCATTCAATCCAATAAGGGAAGAAGAGCTCACCAATCTTGTCAAAATGATTGATTCACATAAAGGGTCACCCTTCAACCTCACCGAGGCACTACTTTCATCAGTGTATAACATCATTTCAAGAGTTGCGTTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCAGTGCTAAACGAAGCCATAACAGTTGGATCAGGTTTTAACATAGGAGATCTGTTTCCTTCTGCTAAATGGCTTCAACTTTTGAGTGGTCTGAGGCCTAAGATTGAGAGGTTGCATCAACAACTTGATCACATTCTAGAAGGTATCATCAATGAACACAAGGAAGCGAAGTCAAAAGCCAGAGAAGGCCATGGTGAAGCACAGGAAGATTTGGTAGATGTTCTGCTAAAATTCCAGGATGATAATGATAGCAACCAGGATATTTACTTAACTAACAACAACATCAAGGCTATAATCCTGGACATCTTTGCTGCTGGAGGTGAGACTTCTGCAACTACGATAAATTGGGCAATGGCTGAGATAATAAGGGATCCACGAGTAATGAAGAAAGCACAAGCTGAGACCCTGAGGTTACACCCTCCAACTCCTCTTTTACTTCCAAGAAAATGTGGACAGACATGTGAGATTAATGGATATCATATACCAGTAGAAAGTAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTACTGGACTGAAGCTGATAGGTTTTATCCAGAGAGATTCATTGATAACTCTGTCGACTATAAAGGGACAAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACCTTTGGTTTAGTCAATATTGAGGTTGCCCTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCAAAGGGAATGAAAAATGAGGATCTGGACCTCACTGAACAATTTGGAGCAACTGTTAGAAGAAAAGAAGATCTATACTTGATACCAGTCACTTTCCATCCTTTGCTGAGTAGGGAAAAATCAGTTCCAAGATTAAAAGTACTGAAGTTGATGGCACATATTCAATCTGATGCAGAAACTGTTCATATTGTGTAA 1530 0.3987 MESQPLHKFGLAISFFLFMILALKIGTNLKKTESSQKIPPAPWKLPVIGNIHNLLSSAPHRKLRDLAKIYGPLMRLQLGEVFTIIVSSPEYAKEIMKTHDLIFASRPTILASDIMAYDSTDIMFSPYGKYWRQLRKICTLELFTHKRVNSFNPIREEELTNLVKMIDSHKGSPFNLTEALLSSVYNIISRVAFGMKCKDQEEFISVLNEAITVGSGFNIGDLFPSAKWLQLLSGLRPKIERLHQQLDHILEGIINEHKEAKSKAREGHGEAQEDLVDVLLKFQDDNDSNQDIYLTNNNIKAIILDIFAAGGETSATTINWAMAEIIRDPRVMKKAQAETLRLHPPTPLLLPRKCGQTCEINGYHIPVESKVIVNAWAIGRDPNYWTEADRFYPERFIDNSVDYKGTNFEYIPFGAGRRICPGSTFGLVNIEVALAFLLYHFDWKLPKGMKNEDLDLTEQFGATVRRKEDLYLIPVTFHPLLSREKSVPRLKVLKLMAHIQSDAETVHIV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00395 509 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 Gene3D Cytochrome P450 24 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 CDD CYP71-like 70 470 - -
Vimu7g00395 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Vimu7g00395 509 SUPERFAMILY Cytochrome P450 37 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 FunFam Cytochrome P450 71D8 31 339 - -
Vimu7g00395 509 PANTHER OS08G0105600 PROTEIN 62 478 - -
Vimu7g00395 509 Pfam Cytochrome P450 338 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00395 509 Pfam Cytochrome P450 39 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00395 Vimu-Chr7 4373929 4376192 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00395 16 477 Cytochrome P450 AT3G26300 41.046 6.94e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00395 - - gmx:102665189 786.949