Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00393 ATGGATTCTCAACTGCTTAATATATCAGCCCTTTTCCTCTCCTTTCTCCTCTTCGTGATTTTGGCACTCAAAATAGGGACCAATCTCAAGAAAACTCAGTCATCTCCAAACATACCACCAGGACCATGGAAGCTACCTGTTATAGGAAACATACACAATGTTCTTTCAACTACACCACACAGAAAATTAAGAGACTTAGCCAAAATATATGGTCCCTTGATGCATCTCCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACCCATGATCTCATCTTTGCATCCAGGCCTACAATTCTAGCTTCTGATATATTATCTTATCAATCCACAAATATAATTTTTTCACCCTATGGAAACTATTGGAGACAGCTACGAAAAATCTGCACAGTGGAGCTTTTCACCCAAAAACGTGTCAGCTCATTCCAGCCAATAAGAGAAGAAGAACTGACCCATCTTGTCAAAATGATCGATTCACATAAAGGGTCTCCCTTTAACCTCACTGAAGCAGTGCTTTCATCGGTATATAACATCATGTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAGGTATTCATATCAGCGGTGAAAGAAGCCGTGGAAAGTGGATCGGGTTTTAACATAGGAGATCTGTTTCCTTCAGCTAAATGGCTTCAAATTGTTACTGGTTTGAGGCCTAAGCTCGAGAGACTGCATGGACAAGTTGATAGGATATTAGGAGACATCATCAGTGAACACAAAGAGGCAAAGTCCAAAGGCAAAGGAGGCCAAGGTGAAGCAGAGGAAGATTTGGTAGATGTTCTTCTAAAATTCCAGGATGGTGATGAAAGTAACAAGGATATTTGCTTAACTATTGACAATATCAAGGCTATAATCCTGGATGTGTTTGGTGCTGGAGGAGAGACATCTGCAACTACCATTAATTGGGCAATGGCAGAGATGATGAAGGATCCAAGAGTAATGAAGAAAGCACAAGATGAGGTGAGAGAGGTATTCAATATGAAAGGAGGAGTAGATAAAGTTTGCATGGATGAACTCAAATATTTGAAATTAGTTGTGAAAGAAACCCTAAGGTTACATCCACCAGCTCCTCTTTTACTTCCAAGAGAAAGCAGAGAAGAATGTGAGATTAATGGGTATCATATTCCAGTGAAAAGCAAGGTAATTGTGAATGCTTGGGCAATAGGAAGAGATCCTAAGTATTGGAGTGAAGCAGAAAGGTTTTATCCAGAGAGATTCATTGATAGCTGTGTTGACTACAAAGGGAACAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGCACCACATTTGGTTTGATAAGTGTTGAGCTAACACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCCATGGGAATCAAAAATGAGGATTTGGACATGACTGAGCAATTTGGAGTCACTGTTAGAAGAAAAGATGACCTATACTTGATACCTGTCTCTCCTCCATCTTTTCTG 1527 0.4008 MDSQLLNISALFLSFLLFVILALKIGTNLKKTQSSPNIPPGPWKLPVIGNIHNVLSTTPHRKLRDLAKIYGPLMHLQLGEVFTIIVSSPEYAKEIMKTHDLIFASRPTILASDILSYQSTNIIFSPYGNYWRQLRKICTVELFTQKRVSSFQPIREEELTHLVKMIDSHKGSPFNLTEAVLSSVYNIMSRAAFGMKCKDQEVFISAVKEAVESGSGFNIGDLFPSAKWLQIVTGLRPKLERLHGQVDRILGDIISEHKEAKSKGKGGQGEAEEDLVDVLLKFQDGDESNKDICLTIDNIKAIILDVFGAGGETSATTINWAMAEMMKDPRVMKKAQDEVREVFNMKGGVDKVCMDELKYLKLVVKETLRLHPPAPLLLPRESREECEINGYHIPVKSKVIVNAWAIGRDPKYWSEAERFYPERFIDSCVDYKGNNFEYIPFGAGRRICPGTTFGLISVELTLAFLLYHFDWKLPMGIKNEDLDMTEQFGVTVRRKDDLYLIPVSPPSFL 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00393 509 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 FunFam Cytochrome P450 71D8 31 502 - -
Vimu7g00393 509 PANTHER OS08G0105600 PROTEIN 62 503 - -
Vimu7g00393 509 Gene3D Cytochrome P450 31 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vimu7g00393 509 Pfam Cytochrome P450 39 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 CDD CYP71-like 70 498 - -
Vimu7g00393 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g00393 509 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00393 Vimu-Chr7 4371495 4373169 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00393 5 503 Cytochrome P450 AT3G26300 43.478 1.59e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00393 - - gmx:102665189 846.269