LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00382	ATGTTTGACTCATTCATACAAAACAAAACCGGTGCAGGTTTATCAGAATGCACATTTAAAACGGGTCGATCCGGACCGAAGCTGGTGGACACGTGGCTTCTGTTTCAACTGGCCCCACTTGCCACGTTAGGTCTACCAAAAATCTTCAACTACGTCGAAGACATCCTCATCCGCACGCTCCCCTTCCCCGCGTGTCTCACAAAGTCCGGTTACAACACTCTATACGAAGCCTTTAGAACGCACGCGACCACGCTCCTCAACGAGGCCGAGAAGCTGGGCCTGGACCGGAACGAGGCCTGCCACAACGTGGTTTTCACCGCGGGCTTCAACGCCTACGGCGGGCTCAAGAACCAGTTCCCCGTGCTCCTGAAGTGGGTGGGCCTCGCCGGCGACAAACTCCACGCGGACCTCGCGAGTGAAGTTCGGGGCGTGGTGAGCGCCGAAGGAGGAGTCACGTTAAACGCGCTGGAGAAGATGCCGTTGGTGAAATCCGTTGTGTACGAGGTGATGCGGATCGAACCCGTGGTGCCTTACCAGTACGGGCGCGCGAGGGAGGACATGGTGGTGCGTAGCCACGACGCATCGTTCGAGGTGAAGAAGGGGGAGATGCTGTTCGGATACCAGCCGTTCGCCACGAAGGATCCTAGGATCTTCGAGGATGCGGAGGTTTTCGTGGCGCGTAGGTTTGTGGGCGAAGGGGAGAAGATGCTGAAACACGTGCTGTGGTCTAATGGGAAGGAGACAGAGGAGTCTTCGGTCAGTAATAAGCAGTGTCCAGGGAAGAATCTGGTGGTGGTGCTGTGCAGATTGTTTCTGGTGGACTTCTTCTTACGATACGACACGTTTCAGTTTGAATTTAAGCAATCTGGGTTTGGTCCTAGCATTACCATTAAGTCCCTCACCAACGCTTCTACCTTGTACTGA	924	0.5498	MFDSFIQNKTGAGLSECTFKTGRSGPKLVDTWLLFQLAPLATLGLPKIFNYVEDILIRTLPFPACLTKSGYNTLYEAFRTHATTLLNEAEKLGLDRNEACHNVVFTAGFNAYGGLKNQFPVLLKWVGLAGDKLHADLASEVRGVVSAEGGVTLNALEKMPLVKSVVYEVMRIEPVVPYQYGRAREDMVVRSHDASFEVKKGEMLFGYQPFATKDPRIFEDAEVFVARRFVGEGEKMLKHVLWSNGKETEESSVSNKQCPGKNLVVVLCRLFLVDFFLRYDTFQFEFKQSGFGPSITIKSLTNASTLY	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00382	307	CDD	CYP74	1	298	-	-
	Vimu7g00382	307	SUPERFAMILY	Cytochrome P450	94	281	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu7g00382	307	PRINTS	E-class P450 group IV signature	159	175	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu7g00382	307	PRINTS	E-class P450 group IV signature	258	276	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu7g00382	307	PRINTS	E-class P450 group IV signature	212	230	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu7g00382	307	Gene3D	Cytochrome P450	2	305	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu7g00382	307	Pfam	Cytochrome P450	136	279	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Vimu7g00382	307	PANTHER	CYTOCHROME P450 26	39	279	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g00382	Vimu-Chr7	4293285	4294250	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g00382	13	304	Cytochrome P450	AT5G42650	50.680	8.71e-101	303

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g00382	K01723		-	gmx:100801764	503.442

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00382	7	4293285	4294250	Vimu7g00382	7	4293285	4294250	ECH