Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00328 ATGGCTTATTATGCATTCTACTCTATCATTTTGGTACACCTTTGCACCAGTTTTGTTGTTGCAAGCTTTGGCAATGACTTGATAAAACCCAAGTTCTCATCCATTCTAGTGTTTGGGGATTCAACAATAAAAACTTTGGCCAAGGGAAATCATTTTCCTTATGGTAAGGATTTCCCTTGTCATGTGCCTACTGGTAGGTTTTCCAATGGAAAATTGGTTCCTGATTTCATTGCCTCAGTGTTGAACCTCAAACACACTGTTCCTCCTTTCCTTCAACCTAACATATCAGATGAAGATCTTCTTAACTGGTGTTTTGATGATTTAACCACTGCTTTAACAGGTGCAATAGCACTGTCACAACAAATTGAATACTTCAAACTTTACGTAGGAAGACTCAAGGCCATCGCAGGAGAACATGAAGCTAAACAGATACTTAGAGATTCTCTTGTTATTATCAGTGCAGGAACTAATGACTTTCTCCTCAACTTTTATGACATTTCCACTAGAAAATTGGAGTTCAACATTGATGAATACCAAGATTACGTGCAGAATAGGATTCAGAGATTCATTAAGTGCTATAGTACCATTGTTCTTGACCAATATCTGTTATACACTGTTTTTGACACTTTGTCACACAGGTTTGAAAGAGACGAATAA 657 0.3714 MAYYAFYSIILVHLCTSFVVASFGNDLIKPKFSSILVFGDSTIKTLAKGNHFPYGKDFPCHVPTGRFSNGKLVPDFIASVLNLKHTVPPFLQPNISDEDLLNWCFDDLTTALTGAIALSQQIEYFKLYVGRLKAIAGEHEAKQILRDSLVIISAGTNDFLLNFYDISTRKLEFNIDEYQDYVQNRIQRFIKCYSTIVLDQYLLYTVFDTLSHRFERDE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00328 218 Pfam GDSL-like Lipase/Acylhydrolase 35 189 IPR001087 GO:0016788
Vimu7g00328 218 SUPERFAMILY SGNH hydrolase 34 201 - -
Vimu7g00328 218 Gene3D SGNH hydrolase 27 201 IPR036514 -
Vimu7g00328 218 PANTHER GDSL ESTERASE/LIPASE EXL3 19 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00328 Vimu-Chr7 3883744 3885326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00328 10 168 Pollen Coat Proteome AT1G75910 29.714 1.16e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00328 - - gmx:100817270 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00328 7 3883744 3885326 Vimu7g00328 7 3883744 3885326 ECH