Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00327 ATGCTTAAACCTTGTCCTACTTTTCTCCTGTTTAATAAAAAGCAGGATTTTTGGTGGCTTAATGAGAGTTTCGGGGCCTTGGGTGGTCCCACCATAGTGGAGAAGCCTAGGAGATCCCCCACTAGGATGCCCAAGGGGATGGGTAAAAGGAACCGGTGCATAGGATTGAACCTCTTACAGTTATTTCTTCTGGGCTTGGACAAGTATGGGAAAGGTGATTGGCGAAGCATATCAAGAAACTTTGTGGTGACAAGAACACCTACACAAGTTGCCAGCCATGCCCAAAAGTACTTTATTCGATTAAACTCCATGAACAAAGATAGAAGGCGATCCAGCATACACGATATCACCAGCGTTAACAACGGTGACGTTTTAGCTCCACAAGGACCAATCACCGGTCAGACGAATGGTTCTGCCACCAATTCTACTGCCAAAGCAACCAAACAAGCCACCCCTGCCTCAGCCGGAGTGCCAGGAGTTGGAATATATGCTGCTCCTACCATTGGACAACCTGTAGGAGGACCCTTAGTATCTGCAGTTGGCACTCCAGTGAACCTTCCTTCACCTGCACACATGGCATACGGTGTCAGGGCTCCGGTTACCGGTGCAGTTGTACCTGGTGCACCGGTAACTGTGAGTCCTGTCACGTATCCTATGCCACATACATCTGTCCCTCACAGGTGA 684 0.4898 MLKPCPTFLLFNKKQDFWWLNESFGALGGPTIVEKPRRSPTRMPKGMGKRNRCIGLNLLQLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVLAPQGPITGQTNGSATNSTAKATKQATPASAGVPGVGIYAAPTIGQPVGGPLVSAVGTPVNLPSPAHMAYGVRAPVTGAVVPGAPVTVSPVTYPMPHTSVPHR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00327 227 CDD SANT 68 98 IPR001005 -
Vimu7g00327 227 Pfam Myb-like DNA-binding domain 60 98 IPR001005 -
Vimu7g00327 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 102 IPR017930 -
Vimu7g00327 227 PANTHER TRANSCRIPTION FACTOR KUA1 61 222 - -
Vimu7g00327 227 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 100 IPR006447 GO:0003677
Vimu7g00327 227 FunFam transcription factor MYB1R1 59 103 - -
Vimu7g00327 227 Gene3D - 59 104 - -
Vimu7g00327 227 SUPERFAMILY Homeodomain-like 60 103 IPR009057 -
Vimu7g00327 227 MobiDBLite consensus disorder prediction 119 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00327 Vimu-Chr7 3878369 3882037 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vimu7g00327 Myb_DNA-binding 3.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00327 - - ccaj:109792793 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00327 7 3878369 3882037 Vimu7g00327 7 3878369 3882037 ECH