Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00324 ATGACTGTGGATGAAGTGGATAGTAGCTCTGAGTGGAGCAGAGAGCAGGATAAGGCATTTGAAAATGCGTTGGCAACTCATCCGGAGGATGCTTCAGATCGATGGGAGAAGATCGCAGCTGACGTGCCGGGGAAGACTATAGAGGAAATCAAACAGCATTATGAACTCTTGGTTGAAGATGTTAGCCAGATTGAATCTGGTTGTGTGCCTTTACCATCTTATAATTCTTCTTCAGAGGGCTCAACAAGCCATGCTAGTGATGAAGGAGCTGGCAAAAAGGGCAGCGGTCTTGGGAATTTTAACAGTGAGTCTAATCATGGGACTAAGGCTTCAAGATCAGATCAAGAAAGACGGAAGGGGATTGCTTGGACGGAGGATGAACACAGGCAAGTTCATTATTGCTTATATAATTTTTGGAAAATCCTACATGCTGCTAATGCTAGTATAGGTTACATTTAA 459 0.4357 MTVDEVDSSSEWSREQDKAFENALATHPEDASDRWEKIAADVPGKTIEEIKQHYELLVEDVSQIESGCVPLPSYNSSSEGSTSHASDEGAGKKGSGLGNFNSESNHGTKASRSDQERRKGIAWTEDEHRQVHYCLYNFWKILHAANASIGYI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00324 152 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 8 131 IPR043363 -
Vimu7g00324 152 MobiDBLite consensus disorder prediction 1 37 - -
Vimu7g00324 152 FunFam Transcription factor SRM1 4 71 - -
Vimu7g00324 152 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Vimu7g00324 152 MobiDBLite consensus disorder prediction 68 85 - -
Vimu7g00324 152 CDD SANT 11 58 IPR001005 -
Vimu7g00324 152 MobiDBLite consensus disorder prediction 8 37 - -
Vimu7g00324 152 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Vimu7g00324 152 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Vimu7g00324 152 SMART sant 8 60 IPR001005 -
Vimu7g00324 152 Gene3D - 5 71 - -
Vimu7g00324 152 MobiDBLite consensus disorder prediction 68 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00324 Vimu-Chr7 3867135 3867593 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vimu7g00324 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00324 - - gmx:100797809 251.906