Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00316 ATGTTTCCAAGAGAGAATCATAGTAACGGCTATGAGCAGGTCCACCAGGTGGGTGGCATGGATCACACCCATTCCCACATCCACAGAGAGCGAGTCCGTCGCGGCACTCGCAGGTTACGTGGCTCCTCTTCCTCTCCATCTCTTAGGGTTTTCGACCAATCGCAACCGAACCACCACCGACCTCCCTGCACTGATTTCGACGTCGCCTACTTCCATTCCTACGCTCACCTCGGTATCCACCAGGAGATGATAAAGGATCGCGTGCGTACTGAAACTTACAGGGAAGCAATCATGCAGCACCAGAGTTTCATTGCAGGCAAAGTTGTGGTTGATGTCGGATGTGGTACCGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAGCGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGGCAAATGAGGTTGTGAAAGCCAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGACGAGTCGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCGGAATGGATGGGCTATATGCTTCTATATGAGAGTATGCTTGGAAGTGTTATTAATGCTAGAGACCGATGGCTCAAACCTGGAGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACGCATACGGACAGATACAACGACAGTGTTGACTTCTGGCGCAATGTTTATGGAATTAACATGTCTGCCATGGTACCATTAGCTAAACAATGTGCATTTGAAGAACCTTCCGTAGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACATGTGGTAAAGTACATCGATAGTTATTCTGTTACCATCAACGAGTTAGAATCTGTAACAACCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTCGATGTTGAATTTAATGGGAATGCAATAGTATCAACCAATTACAATTCAACAACTTCATTTATTGACAATCATCAGATGAATGGTAGTCAGAGGAAAAAGCGAACAAATCCAAATGAAGCACTGGTCCTGTCCACTGCGCCTGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCCATAGAGCTGGAACAAGATCAACTAATTGAAGGTTTAGTGACATTGTCGCAGAGCAGAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGCATGTGAAAGAGTCTGTTATGAGATGA 1257 0.4407 MFPRENHSNGYEQVHQVGGMDHTHSHIHRERVRRGTRRLRGSSSSPSLRVFDQSQPNHHRPPCTDFDVAYFHSYAHLGIHQEMIKDRVRTETYREAIMQHQSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSATLYMAPVTHTDRYNDSVDFWRNVYGINMSAMVPLAKQCAFEEPSVETITGENVLTWPHVVKYIDSYSVTINELESVTTKFKFNSMMRAPLHGFAFWFDVEFNGNAIVSTNYNSTTSFIDNHQMNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGLVTLSQSRENARFMNIHLEYTSGGRSHVKESVMR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00316 418 CDD AdoMet_MTases 109 208 - -
Vimu7g00316 418 Gene3D - 211 417 - -
Vimu7g00316 418 MobiDBLite consensus disorder prediction 16 59 - -
Vimu7g00316 418 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 73 408 IPR029063 -
Vimu7g00316 418 MobiDBLite consensus disorder prediction 39 59 - -
Vimu7g00316 418 FunFam Protein arginine N-methyltransferase 6 211 416 - -
Vimu7g00316 418 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 67 418 IPR025799 GO:0016274|GO:0018216
Vimu7g00316 418 Pfam Ribosomal protein L11 methyltransferase (PrmA) 105 180 - -
Vimu7g00316 418 FunFam Protein arginine N-methyltransferase 6 63 209 - -
Vimu7g00316 418 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 44 406 IPR025799 GO:0016274|GO:0018216
Vimu7g00316 418 Gene3D Vaccinia Virus protein VP39 64 209 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00316 Vimu-Chr7 3797341 3811570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00316 70 418 C2H2 Transcription Factor Family AT3G12270 36.538 9.04e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00316 K11437 - gmx:100809174 721.079