Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00307 ATGGGTGGTGGGTTTCATGTTGGAGCAGCTTCAATTACCACAGTTGCTCATCTGTTGTTGATAGCAATAACAAGCCTTTTATTAGTTTGGTTGCTACACTTCCGAGAAGGTGTTGCCTTCTTCAGCTCTTCCAACCCAACCAAGATTTTCAATGTGAGTTCTCCATCCACTCCTAATGCTATGGTAGCTGGAGTTCTGGGGATCATTGCAGTTTTCAAATCAAAGAAAGAGGTTGGTCTTCCTGATATGTATACATTACACTCTTGGCTAGGCATGTCAGCAATATGCCTATTCGGTTTACAGTATATCATAGGGTTCTTCTCTTATGTCTTCCCTGGTGCAGAAATGTATACTAGAGCTTCCCTTCTGCCATGGCATAGGTTTGTGGGAATGGCCATATTCCTTCTTGCAGTTGGCACAGCTGAGACTGGTTTACTTCAATATTTTCAGTTTTTAAACCTTTTTCGTAGCCAAGAGGCTCTCATAGTCAATTTCACTGCTCTCTTACTCTTCCTCTATGCTTTCTTTGTTGCTCTCTCTGTCACTCTCCCAACAAATTATTCCTAA 567 0.418 MGGGFHVGAASITTVAHLLLIAITSLLLVWLLHFREGVAFFSSSNPTKIFNVSSPSTPNAMVAGVLGIIAVFKSKKEVGLPDMYTLHSWLGMSAICLFGLQYIIGFFSYVFPGAEMYTRASLLPWHRFVGMAIFLLAVGTAETGLLQYFQFLNLFRSQEALIVNFTALLLFLYAFFVALSVTLPTNYS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00307 188 Gene3D - 59 187 - -
Vimu7g00307 188 Gene3D - 5 54 - -
Vimu7g00307 188 PANTHER CYTOCHROME B561-RELATED 7 52 IPR043205 GO:0016491
Vimu7g00307 188 ProSiteProfiles Cytochrome b561 domain profile. 1 182 IPR006593 -
Vimu7g00307 188 SMART 561_7 16 145 IPR006593 -
Vimu7g00307 188 Pfam Eukaryotic cytochrome b561 60 148 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00307 Vimu-Chr7 3718733 3719706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00307 7 186 Chloroplast and Mitochondria Gene Families AT5G38630 33.028 2.85e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00307 K08360 - gmx:100785824 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00307 7 3718733 3719706 Vimu7g00307 7 3718733 3719706 ECH