Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00300 ATGGAAAATGGAAAAAACAATGCATTGGCACTTCAGAACACGCACGTCAAACTTCTCGCCTTCGATCTCCTATCCCTAACACAATTTCCTTTCCATTCTCCCGACGCCGCGACGTCGTTTTTCCGCAGAGGAATCCCAATCTCGCGCGTCGAAATCCTTGGCACTGTCACCCTGCATCACCTCAAGCCCGAGAGGCTCCTCCGCTTCGCAATTGACGATGGCACCGGATGCGTCCCCTGCGTGCTGTGGCTTAACGACGCCAATTCCCCCTCCGTCGTGCGCCGCCGCCGCCACGAGCTCGCCGCGCGCTTCGTCGAAGTGGTGAAGTTTGGGGCGGTTGCAAGGGTGAGAGGCAGACTGAGCCGGTACAAAGGCGGCGTGCAGGTGACCGTGTCGGACGTGGTGACGGAGAGAGATCCGAACGCCGAGATCTTCCACCGCCTGGACTGCATCAGGTTGGCTCGCAACTGTTACAATCTTTTGCCTTCCCCTTCTTTAAGAGGATAA 507 0.574 MENGKNNALALQNTHVKLLAFDLLSLTQFPFHSPDAATSFFRRGIPISRVEILGTVTLHHLKPERLLRFAIDDGTGCVPCVLWLNDANSPSVVRRRRHELAARFVEVVKFGAVARVRGRLSRYKGGVQVTVSDVVTERDPNAEIFHRLDCIRLARNCYNLLPSPSLRG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00300 168 PANTHER REPLICATION PROTEIN A-RELATED 10 158 IPR040260 -
Vimu7g00300 168 Gene3D - 6 161 IPR012340 -
Vimu7g00300 168 Pfam OB-fold nucleic acid binding domain 64 134 IPR004365 GO:0003676
Vimu7g00300 168 SUPERFAMILY Nucleic acid-binding proteins 40 152 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00300 31 153 Core DNA Replication Machinery Family AT2G24490 27.642 2.97e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00300 K23312 - gmx:112997612 264.618