Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00295 ATGGGTTTTGTTTCGTGGCTTGCTGTGTTGTTGTTCTGTGTGGGGTTTGAGTGTGCGTGGTGTCAAGATGATGCTGTGATGAACAAATTGAAGAAGACCATCAATGAACCCAATGGTCTTCAATGGAATGACCCAGATGTGTGTAAATGGGAACACGTTAAGTGCAGCGCCACGAAGAGGGTTACTGCAATTCAAATTGGGGGACAGAGTTTGCAAGGTACTCTGCCTAAGGAACTGGCACAGCTCTCAGAGTTGACACGATTTGAGTGTATGAGCAATGACTTCACTGGGCCATTTCCTAACATGCCAAAGTCCCTTGAGGTTCTGCTCATCCACAACAACAATTTCCAGTCCTTACCGGGTGATTTCTTCACCGGCATGACCAATTTGCAGTCTGTGAGCATTGGCTACAACCCTTTTTCCCAGTGGGGGATTCCTGAGAGCCTCAAGGACTGTGTGGCTCTCAGGAGTTTCTCTGCAACCAGTGCCGGTTTGGTGGGGAAAATCCCAGATTTTTTTGGTAAAGATGGTCCCTTCCCAGGTTTGGTTTCTCTTATCTTGAGTTTTAATTCTCTTGAAGGAGGATTGCCTGCAACCTTTTCTGGGAGTTCTTTAGAGACACTTTGGGTGAATGGTCAGAAAAGTGATGGTAAACTCAATGGTACCCTTGATGTGTTAAAGAGCATGACATATTTGAAACAAATTTGGGTGCACGGTAACTCGTTCACAGGTCCTATACCGGACTTATCGAATCAGGATCAACTATATGATGTGAGCTTGAGGGATAACCAGTTGACTGGGGTTGTTCCATCCTCTCTCACCGCTCTCCCTTCTCTTAAAGTGGTGAATTTGACCAATAACTTACTTCAAGGGTCTCCTCCCTTGTTCAAAGATGGAGTGAAGGTTGATAATGATTTAGACAAGGGGATCAATAGTTTTTGCACAGTGGAGGCTGGTAAGCCATGCAGTCCTCTTGTGGATGCTTTACTTTCTGTTGTTGAACCTTTTGGATACCCTCTGAGACTGGCTGAAAGTTGGAAGGGGAATGACCCTTGTGGTCAAAGATGGTTGGGGATTGTTTGCTCAAATGGTAACGTTTCCGTCATCAACTTGCAGAGCATGAATCTCTCTGGCAACATTTCTCCCAGTTTTGCTTCGCTTACATCTGTGACAAAGCTGCTTCTTGCCAACAATGCCCTCACTGGTACCATACCAAGTGAACTCACCCGCATGCCTGGTCTGGTAGAATTGGATGTTTCCAATAATCAATTGCACGGCAAGGTGCCATCTTTTCGTGAGGGTGTAGTTGTTAAAACTGGTGGGAATCCTGATATTGGAAAGGATAAGCCTCAAGCCCCGCCTGGCTCAAATCCCCAGGGTAAATCTGGAGGTCAAGTTAAGAAAAATAATACTGGAGCAATTATTGGCTCTGTGTTGGGAGGTATAAGTTTAATTGGTTTGGTGGCTTTTATATTTCTTATCTATGGTAGAAAACGTAAGCAAGCCAGCAAAGTTCAAGGTCCTAGTGCAATAGTGGTACACCCTCGTTATTCTGGGGATGGAAGTACTCTGAAGATAAGTGTTGCAGATGCTAGTGCTGGTATTAGTGGTGGTGGGAGTGGCGTAGGAGGAATTGGTGTACTTAGTCCAGCTAGTACGGCTCAACATGTGGAATCTGGGAATATGGTTATTTCAATCCAAGTTTTGAGACAAGTTACGAACAATTTCAGTGAGGCAAACATATTGGGGAGAGGTGGTTTTGGCACTGTATACAAAGGGGAATTGTACGATGGAACAAAAATTGCAGTGAAAAGGATGGAATGTGGAATGATGGTTGAGAAGGGGCTCACTGAGTTTGAGTCTGAAATTGCAGTACTGACTAAGGTTCGACACAGACATCTGGTTGCACTGGAAGGCCACTGCTTGGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAGGGTCCTCTCAGTAAGCATCTATTTGACTGGAAAGAGCAAGGAATACAACCATTGGAATGGAAGAGAAGGCTTTCCATTGCCTTGGATGTTGCCAGAGGTGTTGAATATCTTCACGGTTTGGCCCAGCAAATTTTTATCCATAGGGATCTAAAACCATCAAACATCTTGCTTGGGGATGATATGCGGGCCAAAGTCTCAGACTTTGGATTGGTTCGGCTTGCTCCAGAAGGACAGACCTCATTTGAAACCAGGCTTGCTGGAACTTTTGGATATTTGGCTCCAGAGTATGCAGGTACAAATTTAAATTGCTTTTGA 2283 0.4468 MGFVSWLAVLLFCVGFECAWCQDDAVMNKLKKTINEPNGLQWNDPDVCKWEHVKCSATKRVTAIQIGGQSLQGTLPKELAQLSELTRFECMSNDFTGPFPNMPKSLEVLLIHNNNFQSLPGDFFTGMTNLQSVSIGYNPFSQWGIPESLKDCVALRSFSATSAGLVGKIPDFFGKDGPFPGLVSLILSFNSLEGGLPATFSGSSLETLWVNGQKSDGKLNGTLDVLKSMTYLKQIWVHGNSFTGPIPDLSNQDQLYDVSLRDNQLTGVVPSSLTALPSLKVVNLTNNLLQGSPPLFKDGVKVDNDLDKGINSFCTVEAGKPCSPLVDALLSVVEPFGYPLRLAESWKGNDPCGQRWLGIVCSNGNVSVINLQSMNLSGNISPSFASLTSVTKLLLANNALTGTIPSELTRMPGLVELDVSNNQLHGKVPSFREGVVVKTGGNPDIGKDKPQAPPGSNPQGKSGGQVKKNNTGAIIGSVLGGISLIGLVAFIFLIYGRKRKQASKVQGPSAIVVHPRYSGDGSTLKISVADASAGISGGGSGVGGIGVLSPASTAQHVESGNMVISIQVLRQVTNNFSEANILGRGGFGTVYKGELYDGTKIAVKRMECGMMVEKGLTEFESEIAVLTKVRHRHLVALEGHCLDGNEKLLVYEYMPQGPLSKHLFDWKEQGIQPLEWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAGTNLNCF 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00295 760 SUPERFAMILY L domain-like 35 429 - -
Vimu7g00295 760 SUPERFAMILY Protein kinase-like (PK-like) 558 756 IPR011009 -
Vimu7g00295 760 Gene3D Ribonuclease Inhibitor 325 449 IPR032675 -
Vimu7g00295 760 Gene3D Transferase(Phosphotransferase) domain 1 654 758 - -
Vimu7g00295 760 PANTHER OSJNBA0070M12.3 PROTEIN 10 756 - -
Vimu7g00295 760 MobiDBLite consensus disorder prediction 439 466 - -
Vimu7g00295 760 SMART serkin_6 576 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00295 760 FunFam Receptor-like kinase TMK4 21 319 - -
Vimu7g00295 760 Gene3D Phosphorylase Kinase; domain 1 548 653 - -
Vimu7g00295 760 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Vimu7g00295 760 Pfam Leucine rich repeat N-terminal domain 25 56 IPR013210 -
Vimu7g00295 760 Pfam Leucine rich repeat N-terminal domain 327 362 IPR013210 -
Vimu7g00295 760 Pfam Protein kinase domain 577 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00295 760 FunFam receptor protein kinase TMK1 545 653 - -
Vimu7g00295 760 FunFam Leucine-rich repeat receptor-like kinase 324 448 - -
Vimu7g00295 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Vimu7g00295 760 Pfam Leucine rich repeat 105 158 IPR001611 GO:0005515
Vimu7g00295 760 Gene3D Ribonuclease Inhibitor 21 320 IPR032675 -
Vimu7g00295 760 FunFam Os07g0541700 protein 654 744 - -
Vimu7g00295 760 SMART LRR_typ_2 104 126 IPR003591 -
Vimu7g00295 760 SMART LRR_typ_2 179 202 IPR003591 -
Vimu7g00295 760 SMART LRR_typ_2 387 411 IPR003591 -
Vimu7g00295 760 SMART LRR_typ_2 276 298 IPR003591 -
Vimu7g00295 760 ProSiteProfiles Protein kinase domain profile. 576 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00295 Vimu-Chr7 3567287 3569569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00295 61 752 Receptor kinase-like Gene Family AT5G07280 29.614 5.95e-61 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Vimu7g00295 Pkinase 4.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00295 K00924 - gmx:100776064 1232.24