Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g00295 | ATGGGTTTTGTTTCGTGGCTTGCTGTGTTGTTGTTCTGTGTGGGGTTTGAGTGTGCGTGGTGTCAAGATGATGCTGTGATGAACAAATTGAAGAAGACCATCAATGAACCCAATGGTCTTCAATGGAATGACCCAGATGTGTGTAAATGGGAACACGTTAAGTGCAGCGCCACGAAGAGGGTTACTGCAATTCAAATTGGGGGACAGAGTTTGCAAGGTACTCTGCCTAAGGAACTGGCACAGCTCTCAGAGTTGACACGATTTGAGTGTATGAGCAATGACTTCACTGGGCCATTTCCTAACATGCCAAAGTCCCTTGAGGTTCTGCTCATCCACAACAACAATTTCCAGTCCTTACCGGGTGATTTCTTCACCGGCATGACCAATTTGCAGTCTGTGAGCATTGGCTACAACCCTTTTTCCCAGTGGGGGATTCCTGAGAGCCTCAAGGACTGTGTGGCTCTCAGGAGTTTCTCTGCAACCAGTGCCGGTTTGGTGGGGAAAATCCCAGATTTTTTTGGTAAAGATGGTCCCTTCCCAGGTTTGGTTTCTCTTATCTTGAGTTTTAATTCTCTTGAAGGAGGATTGCCTGCAACCTTTTCTGGGAGTTCTTTAGAGACACTTTGGGTGAATGGTCAGAAAAGTGATGGTAAACTCAATGGTACCCTTGATGTGTTAAAGAGCATGACATATTTGAAACAAATTTGGGTGCACGGTAACTCGTTCACAGGTCCTATACCGGACTTATCGAATCAGGATCAACTATATGATGTGAGCTTGAGGGATAACCAGTTGACTGGGGTTGTTCCATCCTCTCTCACCGCTCTCCCTTCTCTTAAAGTGGTGAATTTGACCAATAACTTACTTCAAGGGTCTCCTCCCTTGTTCAAAGATGGAGTGAAGGTTGATAATGATTTAGACAAGGGGATCAATAGTTTTTGCACAGTGGAGGCTGGTAAGCCATGCAGTCCTCTTGTGGATGCTTTACTTTCTGTTGTTGAACCTTTTGGATACCCTCTGAGACTGGCTGAAAGTTGGAAGGGGAATGACCCTTGTGGTCAAAGATGGTTGGGGATTGTTTGCTCAAATGGTAACGTTTCCGTCATCAACTTGCAGAGCATGAATCTCTCTGGCAACATTTCTCCCAGTTTTGCTTCGCTTACATCTGTGACAAAGCTGCTTCTTGCCAACAATGCCCTCACTGGTACCATACCAAGTGAACTCACCCGCATGCCTGGTCTGGTAGAATTGGATGTTTCCAATAATCAATTGCACGGCAAGGTGCCATCTTTTCGTGAGGGTGTAGTTGTTAAAACTGGTGGGAATCCTGATATTGGAAAGGATAAGCCTCAAGCCCCGCCTGGCTCAAATCCCCAGGGTAAATCTGGAGGTCAAGTTAAGAAAAATAATACTGGAGCAATTATTGGCTCTGTGTTGGGAGGTATAAGTTTAATTGGTTTGGTGGCTTTTATATTTCTTATCTATGGTAGAAAACGTAAGCAAGCCAGCAAAGTTCAAGGTCCTAGTGCAATAGTGGTACACCCTCGTTATTCTGGGGATGGAAGTACTCTGAAGATAAGTGTTGCAGATGCTAGTGCTGGTATTAGTGGTGGTGGGAGTGGCGTAGGAGGAATTGGTGTACTTAGTCCAGCTAGTACGGCTCAACATGTGGAATCTGGGAATATGGTTATTTCAATCCAAGTTTTGAGACAAGTTACGAACAATTTCAGTGAGGCAAACATATTGGGGAGAGGTGGTTTTGGCACTGTATACAAAGGGGAATTGTACGATGGAACAAAAATTGCAGTGAAAAGGATGGAATGTGGAATGATGGTTGAGAAGGGGCTCACTGAGTTTGAGTCTGAAATTGCAGTACTGACTAAGGTTCGACACAGACATCTGGTTGCACTGGAAGGCCACTGCTTGGATGGAAATGAGAAGCTTCTTGTGTATGAATACATGCCTCAGGGTCCTCTCAGTAAGCATCTATTTGACTGGAAAGAGCAAGGAATACAACCATTGGAATGGAAGAGAAGGCTTTCCATTGCCTTGGATGTTGCCAGAGGTGTTGAATATCTTCACGGTTTGGCCCAGCAAATTTTTATCCATAGGGATCTAAAACCATCAAACATCTTGCTTGGGGATGATATGCGGGCCAAAGTCTCAGACTTTGGATTGGTTCGGCTTGCTCCAGAAGGACAGACCTCATTTGAAACCAGGCTTGCTGGAACTTTTGGATATTTGGCTCCAGAGTATGCAGGTACAAATTTAAATTGCTTTTGA | 2283 | 0.4468 | MGFVSWLAVLLFCVGFECAWCQDDAVMNKLKKTINEPNGLQWNDPDVCKWEHVKCSATKRVTAIQIGGQSLQGTLPKELAQLSELTRFECMSNDFTGPFPNMPKSLEVLLIHNNNFQSLPGDFFTGMTNLQSVSIGYNPFSQWGIPESLKDCVALRSFSATSAGLVGKIPDFFGKDGPFPGLVSLILSFNSLEGGLPATFSGSSLETLWVNGQKSDGKLNGTLDVLKSMTYLKQIWVHGNSFTGPIPDLSNQDQLYDVSLRDNQLTGVVPSSLTALPSLKVVNLTNNLLQGSPPLFKDGVKVDNDLDKGINSFCTVEAGKPCSPLVDALLSVVEPFGYPLRLAESWKGNDPCGQRWLGIVCSNGNVSVINLQSMNLSGNISPSFASLTSVTKLLLANNALTGTIPSELTRMPGLVELDVSNNQLHGKVPSFREGVVVKTGGNPDIGKDKPQAPPGSNPQGKSGGQVKKNNTGAIIGSVLGGISLIGLVAFIFLIYGRKRKQASKVQGPSAIVVHPRYSGDGSTLKISVADASAGISGGGSGVGGIGVLSPASTAQHVESGNMVISIQVLRQVTNNFSEANILGRGGFGTVYKGELYDGTKIAVKRMECGMMVEKGLTEFESEIAVLTKVRHRHLVALEGHCLDGNEKLLVYEYMPQGPLSKHLFDWKEQGIQPLEWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAGTNLNCF | 760 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g00295 | 760 | SUPERFAMILY | L domain-like | 35 | 429 | - | - | |
Vimu7g00295 | 760 | SUPERFAMILY | Protein kinase-like (PK-like) | 558 | 756 | IPR011009 | - | |
Vimu7g00295 | 760 | Gene3D | Ribonuclease Inhibitor | 325 | 449 | IPR032675 | - | |
Vimu7g00295 | 760 | Gene3D | Transferase(Phosphotransferase) domain 1 | 654 | 758 | - | - | |
Vimu7g00295 | 760 | PANTHER | OSJNBA0070M12.3 PROTEIN | 10 | 756 | - | - | |
Vimu7g00295 | 760 | MobiDBLite | consensus disorder prediction | 439 | 466 | - | - | |
Vimu7g00295 | 760 | SMART | serkin_6 | 576 | 760 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu7g00295 | 760 | FunFam | Receptor-like kinase TMK4 | 21 | 319 | - | - | |
Vimu7g00295 | 760 | Gene3D | Phosphorylase Kinase; domain 1 | 548 | 653 | - | - | |
Vimu7g00295 | 760 | ProSitePatterns | Protein kinases ATP-binding region signature. | 582 | 604 | IPR017441 | GO:0005524 | |
Vimu7g00295 | 760 | Pfam | Leucine rich repeat N-terminal domain | 25 | 56 | IPR013210 | - | |
Vimu7g00295 | 760 | Pfam | Leucine rich repeat N-terminal domain | 327 | 362 | IPR013210 | - | |
Vimu7g00295 | 760 | Pfam | Protein kinase domain | 577 | 753 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu7g00295 | 760 | FunFam | receptor protein kinase TMK1 | 545 | 653 | - | - | |
Vimu7g00295 | 760 | FunFam | Leucine-rich repeat receptor-like kinase | 324 | 448 | - | - | |
Vimu7g00295 | 760 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 701 | 713 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu7g00295 | 760 | Pfam | Leucine rich repeat | 105 | 158 | IPR001611 | GO:0005515 | |
Vimu7g00295 | 760 | Gene3D | Ribonuclease Inhibitor | 21 | 320 | IPR032675 | - | |
Vimu7g00295 | 760 | FunFam | Os07g0541700 protein | 654 | 744 | - | - | |
Vimu7g00295 | 760 | SMART | LRR_typ_2 | 104 | 126 | IPR003591 | - | |
Vimu7g00295 | 760 | SMART | LRR_typ_2 | 179 | 202 | IPR003591 | - | |
Vimu7g00295 | 760 | SMART | LRR_typ_2 | 387 | 411 | IPR003591 | - | |
Vimu7g00295 | 760 | SMART | LRR_typ_2 | 276 | 298 | IPR003591 | - | |
Vimu7g00295 | 760 | ProSiteProfiles | Protein kinase domain profile. | 576 | 760 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g00295 | Vimu-Chr7 | 3567287 | 3569569 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g00295 | 61 | 752 | Receptor kinase-like Gene Family | AT5G07280 | 29.614 | 5.95e-61 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Vimu7g00295 | Pkinase | 4.5e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g00295 | K00924 | - | gmx:100776064 | 1232.24 |