Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00294 ATGGTATTACTGGCAGTGACTGGACGAGTTACAACAAAGGTTGATGTTTACAGCTATGGAGTGATTCTGATGGAGATGATAACAGGAAGAAAAGCAATTGACAACAGCCAACCAGAAGAGAATGTCCACCTTGTTACATGGTTCAGGAGGATGCTACTGAACAAAGAAGACTCTTTTGAGAAGATTATTGACCCCATAATGTGTATTGATGAGGAGGCCCTACCAAGCTGTAGGACTGTGGCTGAGTTGGCTGGCCACTGTTGTGCAAGGGAGCCTTACCAGCGTCCAGACATGAGCCATGTGGTGAATGTGTTGGCTCCTCTTGTTGAGATTTGGAAGCCTTCTGAGACAGATGATGAAGACCTTTATGGAATTGACTTGGACATGACATTGCCTCAAGCACTCAGAAAATGGCAGGCTGTTGAAGGAAGGAACACCTTTGATACTTCTTCATCAATGCTTACCAGTGAAGAAGAAAATACACAATCTAGCATACCAACAAGGCCATTTGGATTTGCTAATTCTTTTAATTCCTCTGATGGAAGATGA 549 0.4335 MVLLAVTGRVTTKVDVYSYGVILMEMITGRKAIDNSQPEENVHLVTWFRRMLLNKEDSFEKIIDPIMCIDEEALPSCRTVAELAGHCCAREPYQRPDMSHVVNVLAPLVEIWKPSETDDEDLYGIDLDMTLPQALRKWQAVEGRNTFDTSSSMLTSEEENTQSSIPTRPFGFANSFNSSDGR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00294 182 PANTHER OSJNBA0070M12.3 PROTEIN 5 182 - -
Vimu7g00294 182 MobiDBLite consensus disorder prediction 149 182 - -
Vimu7g00294 182 Pfam Protein tyrosine and serine/threonine kinase 8 104 IPR001245 GO:0004672|GO:0006468
Vimu7g00294 182 Gene3D Transferase(Phosphotransferase) domain 1 3 126 - -
Vimu7g00294 182 SUPERFAMILY Protein kinase-like (PK-like) 7 123 IPR011009 -
Vimu7g00294 182 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00294 Vimu-Chr7 3565703 3566251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00294 5 105 Receptor kinase-like Gene Family AT4G02010 43.689 3.76e-17 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Vimu7g00294 PK_Tyr_Ser-Thr 3.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00294 K00924 - gmx:100776064 302.367