Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00259 ATGGGGCCCGAGGACGTACGAAGAAACTCAATGGTGACCACAAGAAACATGGGCAATTGGCAGGATCTTATGGAGTTGATTAAAGAGATGCAGAGACAAATGCAAGAGATGCAGAGGAGGCATGAGGAGATGAACCGAGGCTACCCAAGGAACCCCATCGGTTCAAACAGTATAGGCGGAGGGCCTTTTGCCCTTCACCATGGAAGTTATGGAGGCACCAATGCTCGAGAAGTTGACACTGTTCATCTTCGAGAAATACGGCAAATCGACAGACCTAGACGAACACCTATGCTTGGCGTCCACTCTATCGTTGAAGGGAGAGGCATTGATCTAATTCAACACCCTACCACCGAACATTGTGGATTGTTTCTCCATGCTCGCACCTTGTTTAACCGCACAAAGCAAGGGAAAGACAAATCTCCGAAGGCTTTCATTGATCACTACAACAAAAACCCTCTACAGGGCTCGTGTCTCATCCAGAAAGACGTTGTTCGAGTGGATGCACGGTGTTGGTGGGTGAATTACCGGTGCATGTGTGAGTCGAAAAGGTTGAAGCACGAGGTGAGTTGTGGGACCTTCTGTCGTTGGAAGCGCGAGGCTGAAGCACGTGTTAAGTGGAGATATATTGATACTGTGTTGTGCGTAATGGGCGACGTTTTTTACTGTGTTTTCCACCATGGGGGGAAGTTCATTACTGATGGTACCTTGAAGTATGAAGGGGAGACAACAACTTTGTCCTTTGACCTTGATGTCTGGAATTATTTTGTGGTTGTTAGTGTAGTGAAAAGTTTTGGATATGATAACTTTAAACAATTATGGTACTGTATAAGAGGGGGTTCAATGTTGAAAAATAAGTTGGAAGAATTGATTGATGACACTGGTGCCATGCATATGGCTAACTTAGGTAGGCTTAATGGTGAGGGTGAAGAAGATGGTGACGGTGTTCATGTAAATGGTGAAGTTGATGGTGACTTAGAAGAGGTGCATGAGGGTGAAGAAGATGGTGATGCTGTTGAAGTAGAGGTTGAAGGTCATGGTCACGTAGAAGAGTTCCATGAGGTTGAAGAAGATGTTAATGGTGTTAAAGGAGTTGTGGAGGATGAAGTTCATGTTTGTAGTTGGAGTACATCTACTGATGAAGGTGATGTACATGAAAATAATGAGTGCTTAGAGGGACTTGTGGATGTGAGTGTTCAATGTGATATAAATGGTGATATAGATGGTAATGTGGAAGAATTACTTATTGCAACCGATAGTGATGAAGAGGTTAATGACACTGAAGGTTATGAGAGGTTTAATACTTTTTGTATGACAACAAGTGTGGTGGACTTTACATGGGAAGTAGGGACTCTTTTTACAAATAAGCAAGATATTATCGATGCTGTAAAAGGGTATGCGTTGGAAAATGGTAGGAATATAAAGTTTGTCAAAAATGACAAAAGAAGATTGAGGATGAAGTGCTTTGGTGCAAAAGGAGAATGCCCATGGACCATATATTGTGCTTATATGGAGGCTGAGAAATCATGGCAGCTGAGAACTAAAAATGACATTCACACATGTAGTAGGGAGTTCAATCTCAAGTTACTTGACGCCAAGTGTTTTAGCTTAAAGTCGGAGAAAACAATAAGGGAAAATCCTAAAATGAAGGGTGTAAATATTCGTGAAAAAGTTCAAAGGAAGTGGAACATAGGTATATCTAGGTGTATGGCTTATAGAGCCAAAGCTATTGCTTCTGAGCACATTGATGGGTCCTTTAAAGAACAATATAAGAGGATATATGATTATGCACATGATTTGTTGGGAAGAAATCCTGGATATATAGTTAAAGTGGTTGTTGAGAATAATGAGGCTGAGGCATGCAAAGACAGTTTTGTCTGTTGTAGACCAATAATTGGACTAGATGGGGCCTTTTTGAAAGGGAAGTATTGTGGTGAGTTGTTAACAACTATTAGGAGAGATGGAAAGGATCAAATGTTGCCCATTGCATATGCGATGGTAGAAGGGGAAAACAAAGATTCATGGTCCTGGTTTTTGAATCTTTTGATTGATGATCTTGGTGGTCATGAAAGGTTCTGTGTCAGACACTCATATTCAAACTTTAGGAAGAAATTTCTTAGTAAAAATATGAAAAAACTGATGTGGAGGGCAACTACTGTCACTCATCCACAAAATTGGGAGAGGGAAATGAGAAACACCGAAGATGTCAATGAAGACGCATTCAAGCATTTGATAGCCATCCCTCTAAGATACTGGTCAAGGTCCAGGTTCAGTCCAACACCAAAATGTGACACATTGGAGATGGAGCATCACATGAATCCCATGTTGTCACTCCTTAGTCGCAATGAATTCATTCCAAGTTGCTTTATGAAGTCCACCTATGAAGAAACATATGCATCAATCGTATACCCCATCAACGACAACAACATGTGGGACCTACAACCATATCCAGATGTCATGACTCCTTACAAAGGAGTTATGTCTAGAAGACCTAAAAGGAAAAGAAGATTGGAACAGTGGGAGATGAAAAAAGATGATTCTCGAATGACCAAGGTTGGTTTGCACAAGAGATGCGGGCTATGTAGGAAGGTTGGGAACAACAAGAGTCGTTGCCCCAAAGCTACCCAACAACTTACTGCTTCATCACAACCTGTGATGCCATCATCACAATTATCTGAAGTCTGCAATGGCACTTTCGGCCTAAGATCGTGGCAGAAGATTGTGGTTGGGGATGTGGTCAAAGTAGAAAAACATCAATTTTTTCCAACCGACTTGCTTCTCTTGGCGTCAAGTTATGAGGATGGAATATGCTATCTGGAAATAATGAATTTAGATGGAGAGACCAACTTCAAGGTGAAGAGATCCTTGGAGGCTACCTTGTCTCTAGATAACGACCAAGCTTTTAAGGATTTCTCTAGAACAATATATTGTGAAGATCCAAATCCCAATCTTTACACTTTTATTGGGAACTTTGAGCATGAAAATCAGGTTTATCCTCTTGATCCTAGTCAAATTCTTCTCAAACATTCGAAGCTTATGAATACTGATCATGTTTATGGAGTGGTCATTTTCACTGGACATGACAGCAAAGTCATGCAAAATTCTACAAAATTCCCTTGA 3117 0.4103 MGPEDVRRNSMVTTRNMGNWQDLMELIKEMQRQMQEMQRRHEEMNRGYPRNPIGSNSIGGGPFALHHGSYGGTNAREVDTVHLREIRQIDRPRRTPMLGVHSIVEGRGIDLIQHPTTEHCGLFLHARTLFNRTKQGKDKSPKAFIDHYNKNPLQGSCLIQKDVVRVDARCWWVNYRCMCESKRLKHEVSCGTFCRWKREAEARVKWRYIDTVLCVMGDVFYCVFHHGGKFITDGTLKYEGETTTLSFDLDVWNYFVVVSVVKSFGYDNFKQLWYCIRGGSMLKNKLEELIDDTGAMHMANLGRLNGEGEEDGDGVHVNGEVDGDLEEVHEGEEDGDAVEVEVEGHGHVEEFHEVEEDVNGVKGVVEDEVHVCSWSTSTDEGDVHENNECLEGLVDVSVQCDINGDIDGNVEELLIATDSDEEVNDTEGYERFNTFCMTTSVVDFTWEVGTLFTNKQDIIDAVKGYALENGRNIKFVKNDKRRLRMKCFGAKGECPWTIYCAYMEAEKSWQLRTKNDIHTCSREFNLKLLDAKCFSLKSEKTIRENPKMKGVNIREKVQRKWNIGISRCMAYRAKAIASEHIDGSFKEQYKRIYDYAHDLLGRNPGYIVKVVVENNEAEACKDSFVCCRPIIGLDGAFLKGKYCGELLTTIRRDGKDQMLPIAYAMVEGENKDSWSWFLNLLIDDLGGHERFCVRHSYSNFRKKFLSKNMKKLMWRATTVTHPQNWEREMRNTEDVNEDAFKHLIAIPLRYWSRSRFSPTPKCDTLEMEHHMNPMLSLLSRNEFIPSCFMKSTYEETYASIVYPINDNNMWDLQPYPDVMTPYKGVMSRRPKRKRRLEQWEMKKDDSRMTKVGLHKRCGLCRKVGNNKSRCPKATQQLTASSQPVMPSSQLSEVCNGTFGLRSWQKIVVGDVVKVEKHQFFPTDLLLLASSYEDGICYLEIMNLDGETNFKVKRSLEATLSLDNDQAFKDFSRTIYCEDPNPNLYTFIGNFEHENQVYPLDPSQILLKHSKLMNTDHVYGVVIFTGHDSKVMQNSTKFP 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00259 1038 Pfam MULE transposase domain 631 679 IPR018289 -
Vimu7g00259 1038 Coils Coil 20 47 - -
Vimu7g00259 1038 Gene3D - 838 1035 - -
Vimu7g00259 1038 SUPERFAMILY Calcium ATPase, transduction domain A 894 1033 IPR008250 -
Vimu7g00259 1038 Pfam MuDR family transposase 443 506 IPR004332 -
Vimu7g00259 1038 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 897 1036 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00259 Vimu-Chr7 3203493 3211449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00259 895 1038 Primary Pumps ATPases AT3G13900 73.611 2.48e-62 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00259 - - var:108319502 659.448