Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00244 ATGAACATACCCCTCAGTGAGCCTCCACCTCACGGAGCCGGCAGCTGCAGGCGTGGTCTAAATTTGTCAACTGAGTACACTGTACCAGAAGAAGTTAAAACTGTGAGCTTTGAAATTTGCGCTCATGAGTTGGGATCGATTATTGAGGGACGTGATGTGAAGAACTTGAAAATTCATGGTGGGGTTGAGGGTATCACAAACAAACTAAATACCTCAATTGATGACGGGATATCAACATCTGAGCACTTGTTGAATCAAAGAAAAGAAATTTATGGAGTTAATAAATTCACTGAAAGTCCAACTCGCGGATTCTGGGTTTTTGTATTGGAAGCCTTTCAGGATACAACCCTCATGATACCTGTTGTTTATGCCTTAGTCTCTTTGGTTGTTGGTATAGTAATGGAAAGTTGGCACAAAGGTGAACAGGATGGAATTGGTATTGTTGCTAGCATATTGCTCATAGTGTTTGTCACTGCCACAATCACCAAAGACGCCCGGCTAACATTATCAGCTTATGCGCAACGTTCTCGCGCCAATGACATGCTAACCTTGTTTGTATCGTTCCAATTCAGCATCCACGGCGAGCCCGACCGTCCGACCAAGATTAAAGATCAGAGCGTCAAGATTAAGAAGACCTTTGACAGATACCCAACTGAACGTATTTCAGGAAAGGGATCAAAGACTCAACTGAACGAAGCTTACGAAAAGAAGACGAGAACGAACCGCACATCCATGACGCGAGAACCCGATCCGCGACCGGTGCAAATCGAACTCAAACAAGTACCCTTGCTGCATCAAATTCCCAATCACAGAAAATCCAGAACCCGGTCGAACTGCCTGAACCGCGAGACACTTTACTCCATCCACCGGCTCAATAAAATAATTCCCCGCCGGCGGCGACAGCACCGATTTTCCGGCGAGGAAGAATCTCAGCTTCGGCAGCCTCGGCCTTGTGATGCCGGAGACATTAACACAAAGGTCGAACCCGAGCGCGGCGGTTCCCTCCGCCGCAGGAAGCTTCACGCGCCGACGGAACGCGGCCAAAACCTGCCTATAATCCAGGACGGTGCCTCCGTTTCCGTTATCATCGATCCCCCAAACGGAAGGTTTTATCGGCAACCTAATGCCGTCGACGGAGACACTCTGGATGATGATGTAATAAAACGAGGGAGACAGAGGGTTAGTGACAAAAGGCGTGTAACTGAACAGCTTCCGCGAAATGACGTCGGTGTAGTCGAGAAGACAGTAAGAGAAGGTGTTACCAAATTTGCGTCCAAGTTGGGAAGTAAACGAAATGGGCCCGCGGCCCAGTCCCATTACGCCCTGCGCGCCGTTGAAGCTGGAGCCTGTTACACTGGGGCCAGAGGTTTTAAACCCACACCCGAATTCCAGGTTTTTAATTTTACCATGTTTGTTGGAGCTGGTGTTGAACGTCGTCGTTTCCTTGGAGAAGAAGCCCGTTGTTGTGGACCCATCCGCATAGGAATATTCGTAGCGGCAGGGTGTGTGGAGTTTGGTGCGGTTGTTACAGTGTGTGGGTGTGGGGTGAGGGACGAATCGACACGGCGAGTCGTAGCAGTGGTAGGAGGAGAAGCTTCTGGAATGTCGGGGCAGGAATGCGGATCCGGGTCGCTTGGTGGAGCAGTTACGGCAGGCGGAGCATTTCACCCAGACAAGGTCGCTGCCGGTGTCGACTACCAGGAGGAGGCGCTGCGGCGGGGATCCGATGCGGAGGTCCGCAAAGTACTGCCCGGAGCCCATGGCGGCGCCGGAGGTGAGCGGGGATTGAGGCGAAGTACGGAGGCCGGAGATGCGGTGGAGGTCGGTGGCGAGGATGTTGGAGACGTTGAAGACTTGAGGTACTCGGTTGACGAATGTGTAAGGGTGAGAATGGTGAAGAAGAAGACCAAGAAGAGGAAAGAGTGGAGCGAAGAATACATCGTTGAATGA 1950 0.5113 MNIPLSEPPPHGAGSCRRGLNLSTEYTVPEEVKTVSFEICAHELGSIIEGRDVKNLKIHGGVEGITNKLNTSIDDGISTSEHLLNQRKEIYGVNKFTESPTRGFWVFVLEAFQDTTLMIPVVYALVSLVVGIVMESWHKGEQDGIGIVASILLIVFVTATITKDARLTLSAYAQRSRANDMLTLFVSFQFSIHGEPDRPTKIKDQSVKIKKTFDRYPTERISGKGSKTQLNEAYEKKTRTNRTSMTREPDPRPVQIELKQVPLLHQIPNHRKSRTRSNCLNRETLYSIHRLNKIIPRRRRQHRFSGEEESQLRQPRPCDAGDINTKVEPERGGSLRRRKLHAPTERGQNLPIIQDGASVSVIIDPPNGRFYRQPNAVDGDTLDDDVIKRGRQRVSDKRRVTEQLPRNDVGVVEKTVREGVTKFASKLGSKRNGPAAQSHYALRAVEAGACYTGARGFKPTPEFQVFNFTMFVGAGVERRRFLGEEARCCGPIRIGIFVAAGCVEFGAVVTVCGCGVRDESTRRVVAVVGGEASGMSGQECGSGSLGGAVTAGGAFHPDKVAAGVDYQEEALRRGSDAEVRKVLPGAHGGAGGERGLRRSTEAGDAVEVGGEDVGDVEDLRYSVDECVRVRMVKKKTKKRKEWSEEYIVE 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00244 649 MobiDBLite consensus disorder prediction 301 315 - -
Vimu7g00244 649 MobiDBLite consensus disorder prediction 297 339 - -
Vimu7g00244 649 MobiDBLite consensus disorder prediction 323 339 - -
Vimu7g00244 649 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 178 IPR023298 -
Vimu7g00244 649 MobiDBLite consensus disorder prediction 583 609 - -
Vimu7g00244 649 Pfam Cation transporter/ATPase, N-terminus 60 127 IPR004014 -
Vimu7g00244 649 PANTHER CATION TRANSPORTING ATPASE 36 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00244 Vimu-Chr7 3019212 3022321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00244 20 160 Primary Pumps ATPases AT1G27770 70.213 5.95e-57 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00244 K01537 - gmx:100810758 236.884