Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00232 ATGGCGTGTCTTTCTTTTCCGCAGTTTCTCTCACTTCCTAGGTGCCACTTGACTTGGTCCTATTGTTGTACTTCTTTTAACACAGTGCAACTTGGGGAACTCAGGTCTGGGTGTAAATGGGGTCATGTGGCAATGGCTAGGAAAAAGGCTTCTCTAGACTCTGCCATAGAAGAACCCAGTGACCATGAATCCGTGGTTGAAAAGAAGACAACTAGGTCATCAAAAACTAAGAGCCCGGCCGGGAAGACAAGGAAGAAAGCAAAAGATGAGTCTCCCGAAGGGAATGATGGTTTCTTAGATAGAGATGATGCCTCCATTGGAGAAAGTTCATCTGCCTCTATTGATACTTCCAAGAAAACTCGAAGGACTCGGAAAAAGGATGCATCTAGTTCTGCTGGCTTGGAAGAAAAGAAGGAAGTCAAGGAAGAGAAAAAGGTTAGAAGGCGAAGGAAAACAGAGGATGTGAACTTAATTGTAGAGGATAAAGTTATTGAGGCAGAAATCAATGACCAAGATGAGTCTTCATTTCTTGAAAATGTGGAGGATGAGAGTGACATTGATTTGGAACTGATAAAAGATGTTGGAGATGACATTAGCTTTACTTATGGATGGCCTCCTCTTGTTTGTTGTTTTGGGGCTGCGCAGCATGCTTTTGTGCCTTCTGGGAGGCCAGCAAATAGGCTTATAAATCATGAAATTCATGAAAGCATGAAGGATGCCTTATGGAGCCCTGAAAAATTTTTTAGGGCTCCAGGCTCCTCTGCTGGTAGTGTTGCTATTGCTCTTGCTACCTTGGGTGGCAAGGTGGCATTCATGGGAAAACTTGCAGATGATATTTATGGTGAAGCTATGCTGTACTATATGAATGCAAATAAAGTCCAGACCCGGTCAGTTCGAATTGATAATAAAAGGGCAACAGCTGTATCATTGATGAAGATTGGTAAAAGGAATCATCTTAAAATGAGTTGTGTGAAACCTTGTGCTGAAGATAGTTTGATGAAGACAGAGCTAAATATCGATGTGCTGAAAGAGGCAAAAGTGTTCTACTTCAATACACATTGTCTGCTTGATCGTAATATGAGGTCAACTACATTGCAAGCCATTAAGATTTCAAAGCATTTTGGAGGGGTTGTTTTCTACGATCTAAACCTTCCTATGCCACTATGGCACTCTAGGGAGGAAACTATTTTGTACATTCAGCAATTCTGGAATCTTGCAGACATTATTGAGGTCACTAAGCAAGAACTAGAGTTCTTATGTGGGATAACACCATCTGAAGAATTTGACACCAAAAACAATGATAGTTTGAAGTTTATCCATTATGAACCCGAAGTGGTTGCTCCACTTTGGCATGAAAATCTTAAGGTTTTATTTGTGACTAATGGAACATCCAAGATACATTATTACACAAAAGAACACGATGGTGCTGTTCTTGGAATGGAGGATGCCCCAATTACCCCATTCACTTGTGACATGTCAGCAACTGGAGATGGCATCGTTGCAGCCCTATTGCGAAAGTTGTCAGTTCAACTTGATTTAATAACTGATAAAGGATACCTGGAACATTGCATCAAGTATGCAATCAATTGTGGGGTTATAGATCAATGGATACAAGGCCGAGTTAGGGGCTTTCCTCCTCGTGAAGATATGGACGACGTAATTCCTGATTCAAATGGAATCATGTCAATTTCAGAAAGAGAATACAGGACAGTAGGAGGACCTTCTGATGAGTAA 1734 0.4112 MACLSFPQFLSLPRCHLTWSYCCTSFNTVQLGELRSGCKWGHVAMARKKASLDSAIEEPSDHESVVEKKTTRSSKTKSPAGKTRKKAKDESPEGNDGFLDRDDASIGESSSASIDTSKKTRRTRKKDASSSAGLEEKKEVKEEKKVRRRRKTEDVNLIVEDKVIEAEINDQDESSFLENVEDESDIDLELIKDVGDDISFTYGWPPLVCCFGAAQHAFVPSGRPANRLINHEIHESMKDALWSPEKFFRAPGSSAGSVAIALATLGGKVAFMGKLADDIYGEAMLYYMNANKVQTRSVRIDNKRATAVSLMKIGKRNHLKMSCVKPCAEDSLMKTELNIDVLKEAKVFYFNTHCLLDRNMRSTTLQAIKISKHFGGVVFYDLNLPMPLWHSREETILYIQQFWNLADIIEVTKQELEFLCGITPSEEFDTKNNDSLKFIHYEPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHDGAVLGMEDAPITPFTCDMSATGDGIVAALLRKLSVQLDLITDKGYLEHCIKYAINCGVIDQWIQGRVRGFPPREDMDDVIPDSNGIMSISEREYRTVGGPSDE 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00232 577 MobiDBLite consensus disorder prediction 52 74 - -
Vimu7g00232 577 CDD bac_FRK 207 541 - -
Vimu7g00232 577 MobiDBLite consensus disorder prediction 83 103 - -
Vimu7g00232 577 FunFam Fructokinase-like 2, chloroplastic 208 558 - -
Vimu7g00232 577 Pfam pfkB family carbohydrate kinase 251 532 IPR011611 -
Vimu7g00232 577 Gene3D - 208 559 IPR029056 -
Vimu7g00232 577 PANTHER HEXOKINASE FAMILY MEMBER 207 551 - -
Vimu7g00232 577 MobiDBLite consensus disorder prediction 115 151 - -
Vimu7g00232 577 SUPERFAMILY Ribokinase-like 236 552 IPR029056 -
Vimu7g00232 577 MobiDBLite consensus disorder prediction 52 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00232 Vimu-Chr7 2900496 2903909 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00232 - - gmx:100786248 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00232 7 2900496 2903909 Vimu7g00232 7 2900496 2903909 ECH