Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00231 ATGTGTGATAAAGATGATTTGGTTCCTATTGTCCCCAGTCATGTGCATTCTATTAACGATTCTGTGTCAGCAGAAGAAGCTGCTGAAGATTATGAGTTTGTGATTCGACAGTTCGTGAAAACTCGTGTTGTCAGTGTCTCAGAGATTAGTGACTGTCCAAAGTTTGATCTCATTCTGCTGGGATTGGGTCCAGACGGCCACATTGCCTCATTGTTTCCCAACCACTCAGCACTGAATGAAAGGGAAGAATGGGTAACTTTCATTACTGACTCCCCCAAACCCCCACCTGAGAGAATCACATTCACCATGCCTGTCATCAATTCTGCATCAAATGTTGCAGTAGTTGTCACTGGTGACAGCAAAGCAGAATCTGTGCACTTGGCAATAGATGATCTTGGACCTGACTGCCCATTAATACCAGCCAGAATGGTCCAACCAGCTATGGGGAAGTTGGTGTGGTTTTTGGATAAACTGGCTGCCTCAAAACTTGAAGAATCCAATTTAAACAAGTAG 513 0.4405 MCDKDDLVPIVPSHVHSINDSVSAEEAAEDYEFVIRQFVKTRVVSVSEISDCPKFDLILLGLGPDGHIASLFPNHSALNEREEWVTFITDSPKPPPERITFTMPVINSASNVAVVVTGDSKAESVHLAIDDLGPDCPLIPARMVQPAMGKLVWFLDKLAASKLEESNLNK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00231 170 Gene3D - 2 165 - -
Vimu7g00231 170 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 153 IPR006148 GO:0005975
Vimu7g00231 170 PANTHER 6-PHOSPHOGLUCONOLACTONASE 8 165 IPR039104 -
Vimu7g00231 170 NCBIfam 6-phosphogluconolactonase 8 163 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vimu7g00231 170 CDD 6PGL 6 155 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vimu7g00231 170 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 164 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00231 Vimu-Chr7 2886232 2891866 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00231 K01057 - gmx:100806593 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00231 7 2886232 2891866 Vimu7g00231 7 2886232 2891866 ECH