Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00227 ATGGATCGGAGCTCTTTCCGGTCGGGAATGCGAAAATCCCATTCTAAACCCGACATATACTCAACCTTCGTGGTTCACGACGATGAAGGCGATGACGACGACGGCGTAGAGACTAACCGCCGGCGGAAATCCGGCGGCGCGCAGCCGCATGACGATCCTTACGCGACCATGGTGTACAAAGACAACGGCCGCGAAGACGACGACGACGACGAATACTCCTCTCTCCCTCCGCTTCTCAAGCGCCTCCCCAAGGACTTTGGTGGCGGAGCGCCGCTGGACTACGATGACGACGATGACGATGACGACGACGCTGGCGACTTCGGCACCGTGATCGTGAAGAGCGACCGTAGACGGCACAGTGATCGCCCTTCTTCCAGCTTGGCTTCGCCGCCGTGGAAGTCTCGGAGTTCGTCTCAGGCGAGTCCTTTGAATAGATTCGGCGAACGGGAAGACGACGGCGATGAGGACGACGGTAGCGGCGGATTCTCGACATTCGTCGTTCGTTCGACGGTGAAGTCTGGCGAGAGAGAGTCGGTAAGCGGAACAGTTGTACGACGGTCCTCCGGCGGCAGCGGCGGTGTCGGTTCGACGATGGAGAGAGCGGTGGCGAGCATGCAGGGGATGGGAGATTTTGGATTCGGAAAGCAGAGAAAGGGAAGTGGATCTTCGCAGAACGATGAGGGACGGCATCACTCGATAACGACGAAGGTTTCGACGAGTTCGATTCCTGAAAGTATTACCAGAGAGGACCCTACGATTAAATACGAATTGCTCAATGAACTTGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGGGATTTGAAAACCTCGGAGATGGTTGCCATCAAAGTGATATCGTTATCCGAAGGGGAGGAGGGGTATGAGGAAATCCGTGGTGAGATTGAAATGTTACAACAATGTAATCATCCTAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATTTAATGGGTGTGACTGACGAGTCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGTCTTGATTATCTACACTCAATTTTTAAAGTCCATAGAGACATCAAAGGTGGGAATATCTTATTAACTGAGCAAGGGGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACAAGGACCATGTCAAAGCGGAATACGATTTTTGGGGCACTTGTTTCTGATCAACCTGCACTGCTGTGGGACATATCCAAATCCCCGCCTGCCACCTGTTGTGGCTACACAGACAGTTGTTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTTGATGTTTGGGCTCTTGGCGTGTCTGCTATTGAAATGGCTGAGGGTGTTCCTCCAAGATCTGACGTACATCCAATGAGGGTTTTATTCATGATATCAATTGAGCCAGCTCCGATGCTTGAGGATAAAGAAAAATGGTCTCTGTATTTCCATGATTTTGTTGCAAAGTGCCTAACTAAAGAGCCTCGGCTCCGTCCTACTGCATCTGAGATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAACTGGATCTGCTGCAATGTTGCCAAAATTAGAGAAGGCAAGGGAAATCAGGGCTTCAATGGCTTTGCAGGTGCAAACACTTGCTCCAGCAGCATCAGAAGATCAGCTAGTTTCAAAACCAAATGATGAATATGGAGACACTGTTCCATCCAGACCTCATAACATTGGTGTTGAGGGGGCTGCTAATTTGTCATCACGTGGCACTGTGAGGAAGCTACGTGAGGTGGAAGATGTAGACATGAGTGAAGGCAACTTTGGCACTGTTATAGTCCATGCTGATGAGTTACATCAGAAGACTACACAATATACAGATTCTGCAGTTTCCGACTCTGCTGTACCCAGTGGCACAGGAGGCAGATTGGCTAACTCTGGGATTGAGAATCAGAAAGTTGACTTGACGAAGACCACCTCTTTAAGAGGATCTAGTGCTACTACCAATACTATTCAATCATCTATACCTTATGCTAGTGATTCAACTGAGCAGAGCCTCAGAATCAAAGGTAGTTTTCGAGCACCAGCTGGAATGGGTAGTGATATATTCAGGAGTGAAACCGGCAGCCATAAAGCATTTGCTTTACAAGATAAGCTCTGGTCCATTTATGCTGCTGGTAATACTGTGCCTATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCTTGTCAGACAACGTACTTGGTGGCCTACAACAGGATACTGGTGGAACCGGAACAGTGGAAGCACTGCAAGAGCTATTCAGTGGTGATGGACAGTCCAAGAAGGGCCGCAGAGCACTAAATGAGCAGATGCCTCTTCCTCCAAGCATTTACCAAAGGTTGACATCAAGTTCTACACTTATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAGGATATGCCACTGCAAGAGCTGCAGGCGACCCAGGAGCAGCGAACTATTCAAAATCTCTCTGACACACTTCGAACCATACTTCGGTTGTAG 2607 0.4837 MDRSSFRSGMRKSHSKPDIYSTFVVHDDEGDDDDGVETNRRRKSGGAQPHDDPYATMVYKDNGREDDDDDEYSSLPPLLKRLPKDFGGGAPLDYDDDDDDDDDAGDFGTVIVKSDRRRHSDRPSSSLASPPWKSRSSSQASPLNRFGEREDDGDEDDGSGGFSTFVVRSTVKSGERESVSGTVVRRSSGGSGGVGSTMERAVASMQGMGDFGFGKQRKGSGSSQNDEGRHHSITTKVSTSSIPESITREDPTIKYELLNELGKGSYGAVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMGVTDESLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTIFGALVSDQPALLWDISKSPPATCCGYTDSCFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKTGSAAMLPKLEKAREIRASMALQVQTLAPAASEDQLVSKPNDEYGDTVPSRPHNIGVEGAANLSSRGTVRKLREVEDVDMSEGNFGTVIVHADELHQKTTQYTDSAVSDSAVPSGTGGRLANSGIENQKVDLTKTTSLRGSSATTNTIQSSIPYASDSTEQSLRIKGSFRAPAGMGSDIFRSETGSHKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGLQQDTGGTGTVEALQELFSGDGQSKKGRRALNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00227 868 MobiDBLite consensus disorder prediction 106 123 - -
Vimu7g00227 868 Gene3D Transferase(Phosphotransferase) domain 1 252 572 - -
Vimu7g00227 868 ProSiteProfiles Protein kinase domain profile. 255 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00227 868 MobiDBLite consensus disorder prediction 1 244 - -
Vimu7g00227 868 FunFam Aurora kinase A 247 336 - -
Vimu7g00227 868 CDD STKc_MAP4K3_like 254 540 - -
Vimu7g00227 868 MobiDBLite consensus disorder prediction 163 194 - -
Vimu7g00227 868 Pfam Protein kinase domain 255 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00227 868 ProSitePatterns Protein kinases ATP-binding region signature. 261 284 IPR017441 GO:0005524
Vimu7g00227 868 SMART serkin_6 255 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g00227 868 SUPERFAMILY Protein kinase-like (PK-like) 241 556 IPR011009 -
Vimu7g00227 868 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 237 414 - -
Vimu7g00227 868 MobiDBLite consensus disorder prediction 124 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00227 Vimu-Chr7 2806085 2826633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00227 1 868 MAP Kinase Kinase Kinase Kinase AT1G69220 56.459 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Vimu7g00227 Pkinase 9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00227 - - gmx:100804995 1284.63