Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00202 ATGGATGAAACACAAGATCAGGATTATTCTTCCAGTCTACCTGAGGTTTCTTTGTCTCGCGATGACAGTGTGAGGTCTTATTCCAATGCGCAAATAAATCGTGGGACGGGGATGTCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGGTCTTGGATTAAAATTGGTAACGATGGGAATTTTGAGACAGTGAGACTTGACAAGGCAACTATAATGAGAAATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCAATGTTTATTTATCCTTCAGCAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGATGTATAATCACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAGTCGCCTTAAGAATGAAAAAGCTGATGATCTACCTTTTGAAATTAGGGCACTGGAGTTGGCTCTAGAATTGACATGCACATCTTTAGATGCTCAGGTAAACGAACTGGAAATGGAAATATATCCCGTGCTAGATGAACTAGCCTCATCTATCAGTACTCTAAATCTGGAACGTGTTAGGAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTTATGGATGATGATGGTGACATGGCTGAGATGTGTCTAACTGAGAAAAAGAGAAGATCTGATACTTACACTATTAATGATTGTTTTCAAACTAATGCATCTGGTAGAGTGATTTCGAAGTCAGCTCCTGCTTCACCCGAGCGAACGACTAGTGGAGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGGAATTCTAGTAAACATGGTAGCTCAATGGTCTCTTCTGATAATGGGGAAAGGATTGAGCCACTCGAAATGTTGCTTGAGGCATATTTTGTAGTCATTGATAATACTCTTAACACACTATTATCGCTCAAAGAATACATTGACGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCAGCTAATACAGTTTGAGCTGCTTCTTACAGCTGCTACATTGGTAGCTGCAGTATTTACTGCTGTAGCAGGTGTATTTGGAATGAACTTTGAAACCACAGTTTTTGACTATCCATCTGGATTCAATTTGGTTTTGGTAATTACTGGTATTGCTTGTATAGCATTGTATTTCGCTCTCCTATTTTATTTTAGGTACAAGAAAGTGCTTGCAGCTTAA 1245 0.3984 MDETQDQDYSSSLPEVSLSRDDSVRSYSNAQINRGTGMSGLKKRGHGSRSWIKIGNDGNFETVRLDKATIMRNCSLPSRDLRLLDPMFIYPSAILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCSRLKNEKADDLPFEIRALELALELTCTSLDAQVNELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRSDTYTINDCFQTNASGRVISKSAPASPERTTSGVQMLQRAFSSIGNSSKHGSSMVSSDNGERIEPLEMLLEAYFVVIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNQLIQFELLLTAATLVAAVFTAVAGVFGMNFETTVFDYPSGFNLVLVITGIACIALYFALLFYFRYKKVLAA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00202 414 FunFam Magnesium transporter MRS2-1 39 122 - -
Vimu7g00202 414 Gene3D Magnesium transport protein CorA, transmembrane region 352 412 - -
Vimu7g00202 414 MobiDBLite consensus disorder prediction 7 23 - -
Vimu7g00202 414 Gene3D Magnesium transport protein CorA, transmembrane region 126 345 - -
Vimu7g00202 414 MobiDBLite consensus disorder prediction 1 23 - -
Vimu7g00202 414 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 402 IPR045863 -
Vimu7g00202 414 CDD Mrs2_Mfm1p-like 51 411 IPR039204 -
Vimu7g00202 414 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 29 412 IPR039204 -
Vimu7g00202 414 Coils Coil 201 221 - -
Vimu7g00202 414 Gene3D - 38 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00202 Vimu-Chr7 2491899 2497366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00202 1 412 MRS2 Gene Family AT2G03620 63.443 9.30e-175 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00202 K16075 - gmx:100803935 720.694