Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00199 ATGGAAGCATCTTCATCCGTGTCTAATAAGACCATAACTTTAGAAGAATGGAACGGTTCATCACCCACAAAGCTCTCTAAGACTTTCACCATCAAGGCTTCTTCTTCCTCTGTCACCATTACAAGATCTGGTGCCCGATTTAGCCATGTTTGGAGACGCTTACTTCAAGCTTTTGTCCCTGAGGCAAGCTTCTATTTTACTCCACATGGCCTTTCAACTTACATTAGGACCATGCTTTCTACCCAGGCTCTCCTGAGTGCTATTGGGGTTGGTGAAAAATCAGCTACTGTCATTGGTGCTACTTTTCAGTGGTTTTTGAGGGATCTAACAGGTATGCTTGGAGGAATCTTGTTCACTTTTTACCAGGGATCAAATCTTGATAGCAATGCAAAAATGTGGCGTTTGGTTGCAGATTTTATGAATGACCTTGGAATGTTAATGGACCTCATTTCTCCATTGTTTCCATCAGCTTTTGTGTTTGTTGTTTGCTTGGGAAGCATCTCAAGATCTTTCACTGGCGTTGCTAGTGGAGCCACTAGAGCAGCTTTAACTCAGCATTTTGCTCTTCAGGATAATGCTGCTGATATATCTGCTAAGGAAGGAAGTCAAGAAACTGTGGCCACAATGATTGGCATGGCCATGGGTATGCTCGTTGCTCGCATTACCATTGGATACCCACTGGCCATATGGCTTTCATTTTTATCTTTGACAGTGTTTCACATGTATGGTAAGGCTCTAAATTATAATTTGTTTCATGCATATCGTTTGCATTGTAGAATTGTGAACTGCAGTATGGTACTAGCAAATTACCGAGCTGTTCGATGCCTGGCATTGAACTCAATAAACCCTGAAAGAAGCTCTATTCTTTTGCATCATTTCATGGAGACTGGCCAAGTTCTCTCCCCTGAACAGGTCTCTTCACTGGAGCATGTTTTGCCCATACGGTTCATTTCATGGAGCTCAAGGAATTCTAATTATATGCATAAGAAAGTACGTTTAGGCATGAGGATTTCTTCATTCGATAACATGGAAATTCTCTTTTCCATTAGCAAGATTCAAATGACATTCAGGGTAAATGAGCTTAATGATCAAGTTCTTTTTTCATTTGACATTAACAGTAAGGAGCATTTGCTTTCTGCGGCATCTTACTATACAAAAGCTAAGTATATACTTGTGGAAAGGAAGGGAATCATTGATGTTATTGTGCATAAAGATTCAAATGCTGCTGATGTCCTAAAGTCATTCTTTCATGCTCTGGTCTTGGCAAAGGATGCTCATAAAAGCAAATCCTTGCATTCAGATGGCCAAAAGTGGGTTGATAATCAATATGAATTATTTATTAAGAAGCTCAAGTCATTAGGTTGGAAAACTGAACGGCTTCTGGCACCTATAATATGGAGGGCGTACTGGAGCTATGAACCATTGGAAGAAAAAATTGATTAG 1443 0.4012 MEASSSVSNKTITLEEWNGSSPTKLSKTFTIKASSSSVTITRSGARFSHVWRRLLQAFVPEASFYFTPHGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLISPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMAMGMLVARITIGYPLAIWLSFLSLTVFHMYGKALNYNLFHAYRLHCRIVNCSMVLANYRAVRCLALNSINPERSSILLHHFMETGQVLSPEQVSSLEHVLPIRFISWSSRNSNYMHKKVRLGMRISSFDNMEILFSISKIQMTFRVNELNDQVLFSFDINSKEHLLSAASYYTKAKYILVERKGIIDVIVHKDSNAADVLKSFFHALVLAKDAHKSKSLHSDGQKWVDNQYELFIKKLKSLGWKTERLLAPIIWRAYWSYEPLEEKID 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00199 480 PANTHER RUS1 FAMILY PROTEIN C16ORF58 5 244 IPR006968 -
Vimu7g00199 480 Pfam Vitamin B6 photo-protection and homoeostasis 68 243 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00199 Vimu-Chr7 2448374 2457678 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00199 - - pvu:PHAVU_003G042500g 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00199 7 2448374 2457678 Vimu7g00199 7 2448374 2457678 ECH