Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00177 ATGGAAGACGTGATAACAGAAGCAGCAGGACCTTCGAGATTCTTGGAAGAAGACCTAAACATCTACACAACTCCATCGCCACCCCTTCCTTCACCTTTCCTCATCTTCCCATATACCCAACAACCCCAACCCCTCAAACCCTCCCTCCTCATCGTCGCCCTCTCCCCTTCCTCCGTCGCCCTCTTCCACCGCCTCCGCACCGCCTCCCCCGCCGCCTCACTCCTCCTCCCTGAACTCTCCCTCTCTCTCCCCGATCATGCCGCCCAAATTTTCCCCCTTTCCCCCTCCGCCCTCCTCGCTGCCATCCCGTTCCCGGTCCCCTCTTCCCGCGCCTACGCCGTCGCCAAGACCCTCCTCGACGGCCGTATCCGCCCCGACTCCGTCCTCATCCTTGACTCCCTCGAGTCGCGCAACTTCCGCGGCAAGCTATCCTCCGATGAGGCCGTGGCGTTTAAGCTGGACACCGCCGCTGAGAGAAAGAGAAGCGGCGGAGAGAAGCTCCTGCCGGATTTGGAGTATTATCCTTCCGGAAGCGTTGTTGACGGGCTGGGCGCTGCCATTCTCGCACGGTGCCAGGTGATGAGCGTGAGAGCGAGCCTGTGTGTTTCGTGGCCTCAGTTCGACGCCTCTGTGGTGTCGTTGATTAAGGGTTTACTTCAGCGCCGCGTGTTGCAGGGATTTGATTTTGATTTGAGTGATGAAGACGTTTTTAAATTTGTTAAACCAGTAACAATGGATCCTTCCTTTACTTCAAAATCCCTTCTGCATGTTGTTCTTATCTTAGGCTTTCTTGGTGCCACCAGATTGCATGCAAGTGACACTCCTCTCACACTGGACTACTATGCATCAACTTGCCCCACTGTGTTTGATATTGTCAGGAAGGAAATGGAATGTGCAGTTCTTTCTGATCCCCGCAATGCAGCAAAGATAGTCCGGCTACACTTCCATGACTGCTTTGTTCAGGGATGCGATGGATCCATTTTGCTTGATGATACAGTCACACTTAAAGGTGAGAAAAAGGCAGCTAACAACATCAACTCTTTGAAAGGCTCGGCAATCGTTGATAGAATAAAAAACATGGTTGAATCAGAGTGCCCTGGAGTTGTTTCTTGCGCTGATATTCTCACAATTGCAGCCAGAGATGCTGTGATTCTGGTAGGGGGACCATACTGGGATGTTCCTGTGGGAAGGAAGGATTCTGTCACTGCAAATTTTGATCTTGCCAACACCAATCTTCCCACTCCAGAGGAGAGCCTTCTCTCTATCATTGCCAAGTTTCTTTACCAAGGTCTATCGGTGACTGATATGGTAGCCCTTGCAGGAGCCCACACCATTGGCATGGCACAGTGTAAGAATTTCAGGTCAAGAATTTATGGAGGCTTTGACTCAACAACATCATTGAAAAATCCAATTTCTGAGAGTCACCTCAGCAACCTGAGATCTGTTTGTCCACCTGTTGGGGGAGGAGACAACAACATAACTGCAATGGACTATTTGACACCTAATCTGTTTGATAATTCTTTCTACCAGTTACTGCTAAATGGGGAGGGAGTTCTCAACTCAGACCAAGAAATGTACTCAAGTTTGTTTGGTATTGAAACCAGAGAGCTTGTGAAGAAGTATGCAGCAGATCCTCTGGCTTTCTTCCAACAGTTCTCAGAGTCAATGGTGAAAATGGGAAATATAACAAACTCGGAAAGCTTCATCACTGGAGAAGTTAGGAAGAACTGCAGATTTGTGAACACATAG 1749 0.4969 MEDVITEAAGPSRFLEEDLNIYTTPSPPLPSPFLIFPYTQQPQPLKPSLLIVALSPSSVALFHRLRTASPAASLLLPELSLSLPDHAAQIFPLSPSALLAAIPFPVPSSRAYAVAKTLLDGRIRPDSVLILDSLESRNFRGKLSSDEAVAFKLDTAAERKRSGGEKLLPDLEYYPSGSVVDGLGAAILARCQVMSVRASLCVSWPQFDASVVSLIKGLLQRRVLQGFDFDLSDEDVFKFVKPVTMDPSFTSKSLLHVVLILGFLGATRLHASDTPLTLDYYASTCPTVFDIVRKEMECAVLSDPRNAAKIVRLHFHDCFVQGCDGSILLDDTVTLKGEKKAANNINSLKGSAIVDRIKNMVESECPGVVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTANFDLANTNLPTPEESLLSIIAKFLYQGLSVTDMVALAGAHTIGMAQCKNFRSRIYGGFDSTTSLKNPISESHLSNLRSVCPPVGGGDNNITAMDYLTPNLFDNSFYQLLLNGEGVLNSDQEMYSSLFGIETRELVKKYAADPLAFFQQFSESMVKMGNITNSESFITGEVRKNCRFVNT 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00177 582 FunFam Peroxidase 279 421 - -
Vimu7g00177 582 PRINTS Plant peroxidase signature 554 567 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 309 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 511 528 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 387 402 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 495 510 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 285 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 349 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 368 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Plant peroxidase signature 434 446 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 ProSitePatterns Peroxidases active site signature. 307 318 IPR019794 GO:0004601
Vimu7g00177 582 Pfam Peroxidase 292 544 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 ProSitePatterns Peroxidases proximal heme-ligand signature. 435 445 IPR019793 -
Vimu7g00177 582 FunFam Peroxidase 413 559 - -
Vimu7g00177 582 Gene3D Peroxidase, domain 2 413 559 - -
Vimu7g00177 582 PANTHER PEROXIDASE 72-RELATED 274 580 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 CDD secretory_peroxidase 276 580 IPR033905 GO:0004601|GO:0042744
Vimu7g00177 582 PRINTS Haem peroxidase superfamily signature 497 512 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Haem peroxidase superfamily signature 387 399 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Haem peroxidase superfamily signature 435 450 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Haem peroxidase superfamily signature 307 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 PRINTS Haem peroxidase superfamily signature 369 386 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 ProSiteProfiles Plant heme peroxidase family profile. 275 581 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g00177 582 Gene3D - 280 581 - -
Vimu7g00177 582 SUPERFAMILY Heme-dependent peroxidases 276 581 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00177 Vimu-Chr7 2219838 2225282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00177 254 582 Peroxidase AT1G68850 72.121 1.17e-176 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00177 K00430 - gmx:100780750 613.994