Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00161 ATGGAAGTGGACAGCGAGAAGAAGCAACAATCCTTGAAAGAGAAGGACTTGTTCAAAGCAGCTGAAGAAGGTGATACTGCAACGTTCCAAGCTCTCTCCGCTGAAACTCTATCCAAAGCGCTCTCTCTCAGAAACGAAGATGCTCGCTCCCTTCTCCACGTTGCCGCCTCTTTCGGCCACTCCCAGATTGGTAGCACTCCATTGCACCGCGCAGCCAGCACTGGTAAATCTGATATGTGTGAACTTTTGATTGAAGAAGGAGCAGAGGTTGACATTGCGGATAGAATCGGTCAAACTCCTCTGATGAATGCTGTGATTTGCCATAACAAAGAGGTAGCTCTCCTTCTGATAAGACATGGAGCAGATGTGGATGTAGAGGATAAGGAAGGGTACACAGTACTTGGTCGTGCTACAGATGAATTAAGACCTATATTAATTGATGCTGCCAAGGCCATGTTGGAGTAA 465 0.4688 MEVDSEKKQQSLKEKDLFKAAEEGDTATFQALSAETLSKALSLRNEDARSLLHVAASFGHSQIGSTPLHRAASTGKSDMCELLIEEGAEVDIADRIGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRATDELRPILIDAAKAMLE 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00161 154 PRINTS Ankyrin repeat signature 64 79 IPR002110 GO:0005515
Vimu7g00161 154 PRINTS Ankyrin repeat signature 112 126 IPR002110 GO:0005515
Vimu7g00161 154 ProSiteProfiles Ankyrin repeat region circular profile. 63 95 - -
Vimu7g00161 154 ProSiteProfiles Ankyrin repeat profile. 63 95 IPR002110 GO:0005515
Vimu7g00161 154 ProSiteProfiles Ankyrin repeat region circular profile. 96 128 - -
Vimu7g00161 154 PANTHER MYOTROPHIN 17 149 - -
Vimu7g00161 154 Gene3D - 2 154 IPR036770 -
Vimu7g00161 154 ProSiteProfiles Ankyrin repeat profile. 96 128 IPR002110 GO:0005515
Vimu7g00161 154 SUPERFAMILY Ankyrin repeat 17 138 IPR036770 -
Vimu7g00161 154 SMART ANK_2a 96 125 IPR002110 GO:0005515
Vimu7g00161 154 SMART ANK_2a 63 92 IPR002110 GO:0005515
Vimu7g00161 154 Pfam Ankyrin repeats (3 copies) 64 127 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00161 66 121 MAP Kinase Kinase Kinase AT3G58760 51.786 2.53e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00161 K06694 - gmx:100795610 172.94