Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00099 ATGCTATGGTCAATCATAGCAGCTCATCTGCCCCAAAGAACAGACAATGAGATAAAGAACTATTGGAATACCAACATCAAGAAAAGACTCATCAGAATGGGCTTAGATCCCATTACCCACAAAACAATAAAACAGAACACGTTTGAACCATTTGGTGGTGGCCATGACAACCCCACGGATGGCATCAATATCTGTCATGAGGCTCAATGGGAGAGTGCTCGACTTGAAGCTGAAGCGAGAGGATCTATGTTGCAAATTGGATCCTCGAATCTGTCTGGGCTCATTTTGAGAAAAATTCCAACTGAACCTTATCTTTCATCACATTCAGTATCAACCAAACACAATACAGTATATAACATGTATGCCCTGGTGCTTGCCCCATATCATGATTTTCGGTCATCTGTATCCACTTTGAACATTCCAACGCTTCCTGCAGTTTCTAATACTGCAGAAAGTTCACTTTCATATAAGAGTGATAATAGTATGATGGGAGCTGGTGGCCAAAGTCAAAAGGTAATGGAAGGTTGGGTATCAAACTTACAAGATGATGACATTATGGTGGCTGTTGAAGCATTCAGAACAGGAAGGTCTGAGAGTATCGAAGAGCTGTTTAATGAATCCACTTCCATTTAG 633 0.4107 MLWSIIAAHLPQRTDNEIKNYWNTNIKKRLIRMGLDPITHKTIKQNTFEPFGGGHDNPTDGINICHEAQWESARLEAEARGSMLQIGSSNLSGLILRKIPTEPYLSSHSVSTKHNTVYNMYALVLAPYHDFRSSVSTLNIPTLPAVSNTAESSLSYKSDNSMMGAGGQSQKVMEGWVSNLQDDDIMVAVEAFRTGRSESIEELFNESTSI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00099 210 ProSiteProfiles Myb-like domain profile. 1 26 IPR001005 -
Vimu7g00099 210 Gene3D - 2 48 - -
Vimu7g00099 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 30 IPR017930 -
Vimu7g00099 210 SUPERFAMILY Homeodomain-like 3 34 IPR009057 -
Vimu7g00099 210 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 136 - -
Vimu7g00099 210 CDD SANT 3 26 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00099 Vimu-Chr7 1297992 1299091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00099 3 80 MYB Transcription Factor Family AT5G15310 57.692 5.80e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00099 K09422 - gmx:100790887 263.462