Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00068 ATGACACGTCATTTCCTCCTCCTTTCTCTGCTATTCTTTGCGTCCACACTCTCTCGTCTCGTCCTAACTGTCACCGCCGGTCACGCTTCCGGTTTCACTTCCGGTGACGCTTCTAGTGACACCGACTTCATTCGCGAAAGCTGCAACGCAACGTTGTACCCTGACCTATGCTTCTCCTCGCTCTCTCGCTACGCCGCCGTGGTGCAACGTAGCCCCGGCGGCCTCGCGCGCGTGGCCGTTGCCGTGGCGCTTGCTAAGGCGCACGGCGCGGCGGCCTATCTCTCGCACCAGACTGCTGCGGTGATTGATGAGGATTCCGGCGCAGGTGGCGCAGGTGCCGCCGCCGCCGTGAACGACTGCTTCGCAAACCTGGAGGACGCTGTGGACGAGATCCGCGGCTCGTTGAAGCAGATGCGGCGACTGAGACCGAACGAAGACTCCGGTTCGGTCCGGTTCGGGGTGAGCAACGTGCTGACGTGGATGAGCGCGGCGCTGACGGACGAGGAAACGTGCACGGATGGGTTCGAGGGCGTAGAAGAAGGTCCCGTGAAGACGAGCGTATGCGATCGTGTAACCAGAGTGAAGAAGTTCACTAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTAATAAGTTATAA 639 0.6009 MTRHFLLLSLLFFASTLSRLVLTVTAGHASGFTSGDASSDTDFIRESCNATLYPDLCFSSLSRYAAVVQRSPGGLARVAVAVALAKAHGAAAYLSHQTAAVIDEDSGAGGAGAAAAVNDCFANLEDAVDEIRGSLKQMRRLRPNEDSGSVRFGVSNVLTWMSAALTDEETCTDGFEGVEEGPVKTSVCDRVTRVKKFTSNALALVNGFANKL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00068 212 Coils Coil 121 141 - -
Vimu7g00068 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 208 IPR035513 -
Vimu7g00068 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 208 IPR035513 -
Vimu7g00068 212 NCBIfam pectinesterase inhibitor domain 18 206 IPR006501 GO:0004857
Vimu7g00068 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 204 - -
Vimu7g00068 212 SMART PMEI_2 39 204 IPR006501 GO:0004857
Vimu7g00068 212 CDD PMEI-like_3 47 210 - -
Vimu7g00068 212 Pfam Plant invertase/pectin methylesterase inhibitor 42 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00068 Vimu-Chr7 894866 895504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00068 6 204 Carbohydrate Esterase AT3G49220 28.293 2.59e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00068 - - gmx:100797734 281.567