Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04511 ATGGCTGATGTAAATGCCGCTTCATTTGAGGCCTTTCTCCAAGGCTGGATGGTGCGCCAAAAAGACTTCCTTGGTGAGCTTCACTCAGCTCATCAACAATATCAGGAGGGGAAGAGAGCAGATGTAAGGCCCTTGATCGACAGGGTCATTTCCCACTATGGTCAATACTTCGAAGAGAAATCAAAGATCGCACACCACAATGTTTTTCTTATTTTCTCACCACCATGGTTCAGTTCATTAGAACAATCCTTTCTTTGGGTTGGGGGCTTCAAGCCTGGAGTGGCTTTTCAGGTTGTGAACACAGCTTTGGGGGACTTGACACAAGACCAAAAGGAGAAGTTGACTGAGCTGAAACAAGAGACCAAAGTGAAGGAGAGAACTCTCAATGATGACTTGGCCAAGCTTCAAGAGAGCGTAGCAGATCCTCCTCTGGTGGGCCTGGCCAGAAGCCAGGGCAGATTGTGTTTCAGCGGTCCCTTCGTGACAGACCAAGGTTCGGTCCCGAGCACTTTCAAAGAGAAATTGGAGAATCTGGTGGCAAATGCAGATGCTTTGAGGACAGACACAGCTCTGAATATTTTGAAGATACTGAGACCTGCCCAGATTCTCAAATTCATGGCTTCTGCGGCTGAGCTTCAGATCAAGGTTAGGTCTTGGGGTTTCGACAAGGATGCCCAGAAAGAAGGCGAAGACTGA 696 0.4799 MADVNAASFEAFLQGWMVRQKDFLGELHSAHQQYQEGKRADVRPLIDRVISHYGQYFEEKSKIAHHNVFLIFSPPWFSSLEQSFLWVGGFKPGVAFQVVNTALGDLTQDQKEKLTELKQETKVKERTLNDDLAKLQESVADPPLVGLARSQGRLCFSGPFVTDQGSVPSTFKEKLENLVANADALRTDTALNILKILRPAQILKFMASAAELQIKVRSWGFDKDAQKEGED 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04511 231 Coils Coil 118 138 - -
Vimu6g04511 231 Pfam Seed dormancy control 25 100 IPR025422 GO:0006351|GO:0043565
Vimu6g04511 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Vimu6g04511 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04511 7 218 Calmodulin-binding Proteins AT1G77920 28.302 1.04e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04511 - - vun:114185413 394.045