Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04501 ATGGCCAAACCAACTCATGCAAAACCAGGTTGTTTTTCTGACTTCTTTCACCTTCTCTTTTGTGCTCAGAATGGAAATACCTCTCAAATGCATCCTTATTCTGACCCCATTAAAAAACCATATGCATCAGAAGCAGTGCATGCTCATAATAATGATGCAAAAATCAATGCAACTAAACCAGGAGTTGTGGCAAGGCTAATGGGCCTTGATTCACTGCCAAGTACCAACTTGGTATCAAACTCAACCACCCCAGATTCAGTTCCAAGAAGTAGGTCAGTGAACTTTGTAGATTACTTGCTCAAGTTTGACACAAGCCAAGCCAACCATCACCAAGTCAAAACCTCAGCATCGTTCAGAGAGGTTCCTGCACCGTTTCAGCACAAAAGCAAAAGCCACGATCTTGTCGTGTTCTACTGGGATAGTGGGAGTGAAGATCATGAAGTTGGATCCTTTTCGAGGATTCAAGAAATGGGGTTGGAAGAATCTAGACAGAGAAAGAAGCAGGGAAGCAAGAACAAGGAGATTGTTGGTGTGACAGAGGAGAGGAACCTCACAAAGAGAAGGCAATTTTCCAAGTTCGAGAATGAGCCTAGAGTGGTTCCTCTTAAGCATGGTTCAAAGGTTCGAAATCACAATGAAGCTAAAGCTTTGGCAACAGTTTCTGCATGTTCTAGGAGTTGTGGTAATGGAAGAAAAGGTGGTAGTAGTGGTCCTAGTGGGTTAGGAACATCCTCAACATTGCCAAATAAGCAGAAGAAATTGCCCTCTGAACCAAAACGTTTGAAGAATACCAGAAAACAACAGGAGATAGAGAGTGAATGTAGCTCAGAGAATTTCAGTGCAATCTCAGTCCTAGACGACTATGACTTTTCATTTCTTTATGGACCTGATTTTCCAGGTTTGTCTCTGAATACCCTTGTTCTTTATCTTGTTTAG 936 0.4209 MAKPTHAKPGCFSDFFHLLFCAQNGNTSQMHPYSDPIKKPYASEAVHAHNNDAKINATKPGVVARLMGLDSLPSTNLVSNSTTPDSVPRSRSVNFVDYLLKFDTSQANHHQVKTSASFREVPAPFQHKSKSHDLVVFYWDSGSEDHEVGSFSRIQEMGLEESRQRKKQGSKNKEIVGVTEERNLTKRRQFSKFENEPRVVPLKHGSKVRNHNEAKALATVSACSRSCGNGRKGGSSGPSGLGTSSTLPNKQKKLPSEPKRLKNTRKQQEIESECSSENFSAISVLDDYDFSFLYGPDFPGLSLNTLVLYLV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04501 311 Pfam DUF761-associated sequence motif 60 76 IPR032795 -
Vimu6g04501 311 MobiDBLite consensus disorder prediction 227 272 - -
Vimu6g04501 311 PANTHER OS05G0128300 PROTEIN 1 292 - -
Vimu6g04501 311 MobiDBLite consensus disorder prediction 159 180 - -
Vimu6g04501 311 MobiDBLite consensus disorder prediction 253 272 - -
Vimu6g04501 311 MobiDBLite consensus disorder prediction 227 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04501 Vimu-Chr6 50809100 50810035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04501 1 210 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 29.572 1.03e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04501 - - gmx:100775965 407.912