Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04464 ATGACATATTCAGAAATGGCAATCGAGAACGGTTCATCGAACTCAAAGGCAACGAGGGACACCAAGGGAAAGATCATCACTTGCAAAGCTGCGGTGGCTTATGGTCCCGGAGAACCCTTCGTGGTGGAGGAAATTCTCGTTCATCCTCCTCAGAAATTTGAGGTTCGAGTCAAAATTCTTTACACTTCCATTTGCCACACCGATCTCAGCGCATGGAGAGGCGATAACGAGTCTCAGCGCGCCTACCCTCGTATCTTAGGCCACGAAGCATCCGGAATTGTGGAGAGTGTGGGGGAAGGGGTGAGCGAGGTGGCGAAAGGGGACACAGTGGTGCCAATATTCAATGGTGAGTGTGGAGAGTGTTGTTATTGCAAGTGTGAGAAGAGCAACATGTGTGAGAGGTATGGGGTGAACCCCATGAAGAAGGTAATGGAAGGAGATGGCAGAAGCAGATTCTCAACACTTGATGGAAAACCCATCTTCCATTTCTTGAACACTTCCACATTCTCCGAGTACACGGTGGTGGATTCCGCCTGCCTCGTCAAGTTTCGTCACTCCGATCACACTCTCACCACCAAAAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGTCAGTCAAACCCACATCTTTGA 636 0.5016 MTYSEMAIENGSSNSKATRDTKGKIITCKAAVAYGPGEPFVVEEILVHPPQKFEVRVKILYTSICHTDLSAWRGDNESQRAYPRILGHEASGIVESVGEGVSEVAKGDTVVPIFNGECGECCYCKCEKSNMCERYGVNPMKKVMEGDGRSRFSTLDGKPIFHFLNTSTFSEYTVVDSACLVKFRHSDHTLTTKNLTLLSCGVSTGQSNPHL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04464 211 PANTHER ALCOHOL DEHYDROGENASE 23 206 - -
Vimu6g04464 211 SUPERFAMILY GroES-like 21 186 IPR011032 -
Vimu6g04464 211 Gene3D - 31 204 - -
Vimu6g04464 211 Pfam Alcohol dehydrogenase GroES-like domain 54 181 IPR013154 -
Vimu6g04464 211 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 87 101 IPR002328 GO:0008270|GO:0016491
Vimu6g04464 211 FunFam alcohol dehydrogenase 1-like isoform X1 36 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04464 Vimu-Chr6 50143476 50144744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04464 54 134 Monolignol Biosynthesis Gene Families AT4G39330 37.805 2.90e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04464 K00001 - gmx:100815166 311.227