Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04382 ATGCTAATAATTCGGCTTAGCAGGGCTCCTGCATCAGAGGGGTCAGCAGGGGTGAAACAGTCACCTGTTGAGAATGTTACAGTTGCGTGCCCTGACCATCTGGTTCTTGCTGATCTTCCAGTTGCAAAGGGCATTGGTGCAGCCACGGCCACTTCTCTTGTGAAGACTTTGGGCCGTAGGTCCCGCCGCCAGCTTGGCGAACGAGTCCATTTCTGTGTTCGCTGTGATTTCCCTGTAGCCATTTATGGACGCCTGAGCCCTTGTGAGCATGCCTTTTGTCTGGATTGTTCTCGAAGTGATTCAATGTGCTACCTGTAA 318 0.5189 MLIIRLSRAPASEGSAGVKQSPVENVTVACPDHLVLADLPVAKGIGAATATSLVKTLGRRSRRQLGERVHFCVRCDFPVAIYGRLSPCEHAFCLDCSRSDSMCYL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04382 105 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 105 IPR040383 GO:0016567|GO:0061630
Vimu6g04382 105 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 105 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04382 1 105 C2H2 Transcription Factor Family AT5G01160 73.333 1.10e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04382 K15685 - gmx:100817582 200.29