Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04334 ATGTTATCCAAGGCCACCGCAGAGGGCGTGCCGGCGCCGTACAACTCGACTGTGGCCACAAGTCTGGGGAGGCGGCGGATTCCGATACACACGACGTTCTACTGGGGACATAAGGTGGACATACTTTTCCGGTGCTGGCCGGGCGACAGCGCCGCCATGTACGCGGTGGCACTGCTCCTCGTGTTCTTTATGGCGGTGCTGGTGGAGTGGCTCTCGTTCACCAACATTGTGAAACTCAAGCCCGGGGGCTCAAACGACGTCGTCGGAGGACTCCTGAAGACGGGGCTTTACGGCGTGCGTTCGGGGCTCTCTTACTTGGTGATGTTGGCCGTTATGTCTTTTAACGGTGGCGTGTTTGTCGTCGCTATAAGCGGCCACGTCATCGGGTTCTTGATTTTCGGGACAAGGGCTTTAAGGAAGAAATCCAATGGGTTGGACTCTTCGAAACCGTAG 453 0.5717 MLSKATAEGVPAPYNSTVATSLGRRRIPIHTTFYWGHKVDILFRCWPGDSAAMYAVALLLVFFMAVLVEWLSFTNIVKLKPGGSNDVVGGLLKTGLYGVRSGLSYLVMLAVMSFNGGVFVVAISGHVIGFLIFGTRALRKKSNGLDSSKP 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04334 150 Pfam Ctr copper transporter family 32 74 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu6g04334 150 Pfam Ctr copper transporter family 91 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu6g04334 150 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 29 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04334 Vimu-Chr6 47149414 47149866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04334 32 143 Inorganic Solute Cotransporters AT5G59030 50.000 4.60e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04334 K14686 - gmx:100803410 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04334 6 47149414 47149866 Vimu6g04334 6 47149414 47149866 ECH