Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04326 ATGAGTAAGATGGATATGTCTCCAGGAGGAGACATGCCTTTAATGCCTAATGGCACAAGCGATATGCAATGTTGCATGATGCAGATGAGTTTCTACTGGGGCAAAGAGGCCACGGTGCTTTTCCGTGGTTGGCCTGGTAACAGTGTTGGCATGTACATCTTGGCCATAATATTAGTGTTTTTCTTAACCATGGCTGTTGAGGTTTTATCAAACCAACCACTCATTAAACCAGGGACAAGTCCCCTTGTGGGAGGACTCATGCAAGCTTTTGTTCAGTTTTTTCGCATCAGCTTCGTTTACATGGTCATGCTTGCTGTCATGTCCTTCAATGGTGGAATATTCATATCTGCGGTGGCCGGCCACACCTTGGGCTTCTTCATCGCCAAATTTCGTGCTCTTGCTCTCGTCAATAAGGAAGAAGACAAAGGGCCTTCCTCGGTTAGGAACAATGTTTGA 456 0.4583 MSKMDMSPGGDMPLMPNGTSDMQCCMMQMSFYWGKEATVLFRGWPGNSVGMYILAIILVFFLTMAVEVLSNQPLIKPGTSPLVGGLMQAFVQFFRISFVYMVMLAVMSFNGGIFISAVAGHTLGFFIAKFRALALVNKEEDKGPSSVRNNV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04326 151 Pfam Ctr copper transporter family 29 70 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu6g04326 151 Pfam Ctr copper transporter family 82 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vimu6g04326 151 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04326 Vimu-Chr6 46914667 46915314 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04326 26 141 Inorganic Solute Cotransporters AT5G59040 44.828 3.49e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04326 K14686 - gmx:100813144 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g04326 6 46914667 46915314 Vimu6g04326 6 46914667 46915314 ECH