Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04320 ATAATAAGTAAACTATTTGTTCATGGTGAGAAACCCCTTGCAGAGTCCCTTGTGATTCTTGAGTACATCGATGAGACATGGACCAACAACCCCATCTTGCCTTCCGATCCTTACCAGAGAGCCTTGGCTCGTTTCTGGTCCAAATTCATTGATGACAAGGTCATGAGTACTTCATGGAAAGCTGTTTTCACGGTTGATGAGAAATGGCGTCTGAAGAATGTTGCAGAAGCATACGAGAGTCTGCAGTTTCTTGAGAATGAGATAAAGGAGAAGAAGTTCTTTGGAGGAGAGGAGCTTGGGTTGGTAGATGTTGCTGCTGTCTATGTAGCATTTTGGATCCCTTTGATTCAAGAAATAGCATGTTTGGAGCTATTGACAAGTGAGAAATTTCCTAATCTGTACAGGTGGAGCCAAGAATTTATGAACCATCCAATTGTCAAAGAATGTCTTCCCCCTAGAGACCCAGTTTTTGCCCTTTTTAAAGGACGTTATGAAGGCCGTTTTGCTTCAAAATTGATTTAA 522 0.4157 IISKLFVHGEKPLAESLVILEYIDETWTNNPILPSDPYQRALARFWSKFIDDKVMSTSWKAVFTVDEKWRLKNVAEAYESLQFLENEIKEKKFFGGEELGLVDVAAVYVAFWIPLIQEIACLELLTSEKFPNLYRWSQEFMNHPIVKECLPPRDPVFALFKGRYEGRFASKLI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04320 173 CDD GST_C_Tau 37 163 IPR045074 GO:0004364|GO:0006749
Vimu6g04320 173 FunFam Tau class glutathione S-transferase 33 170 - -
Vimu6g04320 173 Pfam Glutathione S-transferase, C-terminal domain 57 144 IPR004046 -
Vimu6g04320 173 SFLD Main.3: Omega- and Tau-like 6 165 IPR045073 -
Vimu6g04320 173 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 155 IPR045073 -
Vimu6g04320 173 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 36 168 IPR010987 -
Vimu6g04320 173 SFLD Glutathione Transferase (cytosolic) 6 165 IPR040079 -
Vimu6g04320 173 Gene3D - 36 171 - -
Vimu6g04320 173 Gene3D Glutaredoxin 3 35 - -
Vimu6g04320 173 SUPERFAMILY GST C-terminal domain-like 25 165 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04320 Vimu-Chr6 46660076 46660971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04320 5 164 Glutathione S-transferase Gene Family AT3G09270 45.963 4.28e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04320 K00799 - gmx:100500052 273.863