Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04316 GTGCTACAAACAATGGCTACCAATCAGGAAGAGGTGAAGCTTTTGGGAGTTGTGGGAAGCCCTTTTGTGTGTAGGGTGCAAATTGCTCTCAAATTCAAGGGCGTTGAATACAAATTTTTGGAAGAAAATTTGGGCAACAAGAGTGAATTGCTTCTGAAATACAACCCAGTTCACAAGAAGGTTCCAGTCCTTGTTCACGGTGAGAAACCCCTTGCAGAGTCCCTTGTGATTGTTGAGTACATCGATGAGACATGGAACAACAACCCCATCTTGCCTTCTGATCCTTACCAGAGAGCCTTGGCTCGTTTCTGGGCCAAATTCATTGATGACAAGGTTGTGGGTGCTGCATGGAAATCTGTTTTCAGTGTTGATGAGAAAGAGAGGGAGAAGAATGTGCAAGAGGCATTGGAGGGTCTGAAGTTTCTTGAGGATGAGATAAAGGGGAAGAAGTTTTTTGGAGGAGAGGAGATTGGGTTGGTGGATATTGGTGGTGTGTTCATAGCGTTTTGGATTCCAATTTTTCAGGAAATAGCAGGGTTGCAGTTATTCACCAGTGAGAAATTTCCTAATCTCTATAAATGGAGCCAAGAGTTGATGGATCACTCTGTTGTGAAGGAAGTTCTTCCTCCAAGAGAACCATTGTTTGCCTTCTTCAAAGCCCGCTATGAAAACCTCACTGCCTCACCATAG 690 0.4406 VLQTMATNQEEVKLLGVVGSPFVCRVQIALKFKGVEYKFLEENLGNKSELLLKYNPVHKKVPVLVHGEKPLAESLVIVEYIDETWNNNPILPSDPYQRALARFWAKFIDDKVVGAAWKSVFSVDEKEREKNVQEALEGLKFLEDEIKGKKFFGGEEIGLVDIGGVFIAFWIPIFQEIAGLQLFTSEKFPNLYKWSQELMDHSVVKEVLPPREPLFAFFKARYENLTASP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04316 229 Coils Coil 125 145 - -
Vimu6g04316 229 CDD GST_C_Tau 95 221 IPR045074 GO:0004364|GO:0006749
Vimu6g04316 229 SFLD Main (cytGST) 8 227 - -
Vimu6g04316 229 CDD GST_N_Tau 12 85 - -
Vimu6g04316 229 SFLD Main.3: Omega- and Tau-like 8 227 IPR045073 -
Vimu6g04316 229 Pfam Glutathione S-transferase, N-terminal domain 11 83 IPR004045 -
Vimu6g04316 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 14 212 IPR045073 -
Vimu6g04316 229 FunFam Glutathione S-transferase GSTU6 7 91 - -
Vimu6g04316 229 Gene3D - 94 229 - -
Vimu6g04316 229 SUPERFAMILY GST C-terminal domain-like 83 224 IPR036282 -
Vimu6g04316 229 Pfam Glutathione S-transferase, C-terminal domain 116 199 IPR004046 -
Vimu6g04316 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 217 IPR010987 -
Vimu6g04316 229 Gene3D Glutaredoxin 5 93 - -
Vimu6g04316 229 FunFam Tau class glutathione S-transferase 91 228 - -
Vimu6g04316 229 SUPERFAMILY Thioredoxin-like 12 112 IPR036249 -
Vimu6g04316 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 89 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04316 Vimu-Chr6 46510142 46510979 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04316 8 228 Glutathione S-transferase Gene Family AT3G09270 54.911 2.69e-83 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04316 K00799 - gmx:100807613 382.104