Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g04225 ATGCCGGCAACGATGCCACCACCTTTCCAGAAAAGAAGGGAAAGGAGGCTCTTCCCTAGCAGTGGCATGACCTTAAGCCCTGCCCAGATTGCACCTCCACAGCGTTTTCGCCTTCTTCGAATAACTAGAATCACTAGTTCTTCACTCGGTTCTAGATGTTCATCACCACCAAAACCACAATTGGAAGGAAACCCTCTTTTTCCCAAGGTTGGGTGGTCTGCGAGCAGGGAGCAAGAAATTGGGGAAAAGAAAAATGGAAGTAGAAGACTGAGGCCATTATCTTCTATTGGGTGGAGCAGGCAGTGGCTGAAGACTCGAGAATGGCAGCCTCACTGCTTAGGCTACATTTCCATGATTGCTTTGTCAATGCAAGGTTGTGATGCTTCAATCTTACTGGATGACACTCATAACTTTGTTGGTGAGAAAACTGGCAAACATGTTGTTCACATGCTATTCGGTTTGGTTGTTGGGTTCAGTGACGAAATGCAAGCGGAGAGAACAAAAACGTGTTTGACAGTGATGTTTGCTGATGATCGAAAGAGTGTTGTGACCAAAGGGGTGACACGCGGTGCCTATGATTATCTGATTAACCCTGTGAGAATTGAGGCTTTGAAGAACATATGGCGGCATGTGATTCGGAAGAGAAAGAATGGGTTGAAAGATGTAGAGCAATCAGGTAGTGTGGAATCTCAAACTAACCCAAGGCGTCTCATCGCCGGGCACCGTGAAACCTCTCCTCTCTTGGCTGCTCTTCGTACGAGAGAGGAGGACAACCTTCTCCTTTGTTATGCTATACAACAAGGTTTGAATGGTCTGATGACTCAAAGAAAAGGAAGAAAGGTTGAAGTACCAAGGGTTGCACTGCAGAAAAGTCAAATAGAATGCAGAAAAGTCAACCAGTCAACCAGAAAAGTCGACCAGTTGACCAGAACGCAGTTGACCAGCGCCAGGCGCTGGACCCCCAGCGCCAGGCGCTGGCACGGCATGAGGGAAACCGCCGGGCGATAA 1008 0.4792 MPATMPPPFQKRRERRLFPSSGMTLSPAQIAPPQRFRLLRITRITSSSLGSRCSSPPKPQLEGNPLFPKVGWSASREQEIGEKKNGSRRLRPLSSIGWSRQWLKTREWQPHCLGYISMIALSMQGCDASILLDDTHNFVGEKTGKHVVHMLFGLVVGFSDEMQAERTKTCLTVMFADDRKSVVTKGVTRGAYDYLINPVRIEALKNIWRHVIRKRKNGLKDVEQSGSVESQTNPRRLIAGHRETSPLLAALRTREEDNLLLCYAIQQGLNGLMTQRKGRKVEVPRVALQKSQIECRKVNQSTRKVDQLTRTQLTSARRWTPSARRWHGMRETAGR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g04225 335 Gene3D - 160 322 - -
Vimu6g04225 335 MobiDBLite consensus disorder prediction 1 31 - -
Vimu6g04225 335 PANTHER TWO-COMPONENT RESPONSE REGULATOR 172 312 IPR045279 GO:0009736
Vimu6g04225 335 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g04225 Vimu-Chr6 44277720 44280638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g04225 171 245 Response Regulator Gene Family AT4G16110 56.579 1.50e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g04225 - K14491 gmx:100809583 97.0561