Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu6g04208 | ATGCTAGGTCATCTCACTGCCAAGAGTGACGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCCATAGACAAGAACCAGCCATCTGGGGAGCATAACCTTGTTGAATGGGCAAAACCTTACCTATCTAATAAACGAAGAGTTTTCCGTATAATGGATCCACGTTTGGAAGGTCAATATTCACATACTCGAGCTCAAGCAGCAGCTGCACTTGCCATGCAATGTCTTTCTGTAGAGTCCAAGTGTAGGCCAACTATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACATCATCATGTGCGCAATTCCGGCCAAGGCCGATCCACCGGCACCCATGGTGGTGCAGATGTGCCTAGAATTGCTTCTGCTTATCCTAGACCTACAGCTTCTCTCCTTGGCGGTTGA | 462 | 0.4654 | MLGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVEWAKPYLSNKRRVFRIMDPRLEGQYSHTRAQAAAALAMQCLSVESKCRPTMDEVVKALEQLQESKDMQRKGADHKHHHVRNSGQGRSTGTHGGADVPRIASAYPRPTASLLGG | 153 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu6g04208 | 153 | MobiDBLite | consensus disorder prediction | 105 | 153 | - | - | |
Vimu6g04208 | 153 | PANTHER | OS01G0588500 PROTEIN-RELATED | 2 | 102 | - | - | |
Vimu6g04208 | 153 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 127 | - | - | |
Vimu6g04208 | 153 | ProSiteProfiles | Protein kinase domain profile. | 1 | 101 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu6g04208 | 153 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 103 | IPR011009 | - | |
Vimu6g04208 | 153 | Pfam | Protein tyrosine and serine/threonine kinase | 4 | 98 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu6g04208 | Vimu-Chr6 | 43786704 | 43787165 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu6g04208 | 1 | 108 | Receptor kinase-like Gene Family | AT4G02010 | 46.296 | 4.34e-29 | 109 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Vimu6g04208 | PK_Tyr_Ser-Thr | 1.9e-06 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu6g04208 | - | - | gmx:100819620 | 261.151 |